myRT

myRT report for GCA_003169195.1_20110600_S1S

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Seq: PMQB01000507.1 Bryobacterales bacterium isolate bog_105 73.20110600_S1S.25_contig_16583, whole genome shotgun sequence (4837 bp)
Overview 1 RT 1: 53-3925 bp Neighborhood of RT #1 [53, 3942] RVT-DGRs Avd_like AAA_16 YfmG Feature: gene Location: 53-1177 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 263-902 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 263-902 bp Feature: gene Location: 1161-1454 bp Feature: domain Description: Avd_like Location: 1167-1425 bp Feature: domain Description: Avd_like Location: 1 1 67-1 425 bp Feature: gene Location: 1588-3942 bp Feature: domain Description: AAA_16 Location: 1681-2056 bp Feature: domain Description: AAA_1 6 Location: 1 681 -2056 bp Feature: domain Description: YfmG Location: 3061-3925 bp Feature: domain Description: YfmG Location: 3061 -3925 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), AAA_16 (pfam13191), YfmG (COG1262), RVT-DGRs

Seq: PMQB01000702.1 Bryobacterales bacterium isolate bog_105 73.20110600_S1S.25_contig_19634, whole genome shotgun sequence (4652 bp)
Overview 1 RT 1: 91-4052 bp Neighborhood of RT #1 [91, 4052] RVT-GII GIIM PRK09293 Feature: gene Location: 91-324 bp Feature: gene Location: 523-1773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 730-1345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 730-1345 bp Feature: domain Description: GIIM Note: maturase Location: 1393-1621 bp Feature: domain Description: GIIM Note: maturase Location: 1393-162 1 bp Feature: gene Location: 1963-2916 bp Feature: domain Description: PRK09293 Location: 1975-2905 bp Feature: domain Description: PRK092 93 Location: 1975-2 905 bp Feature: gene Location: 3087-4052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09293 (class 1 fructose-bisphosphatase), RVT-GII, GIIM (pfam08388)

Seq: PMQB01000595.1 Bryobacterales bacterium isolate bog_105 73.20110600_S1S.25_contig_2418, whole genome shotgun sequence (7788 bp)
Overview 1 RT 1: 4934-7336 bp Neighborhood of RT #1 [4934, 7785] rve RVT-GII Feature: gene Location: 4934-5626 bp Feature: gene Location: 5532-6452 bp Feature: domain Description: rve Location: 5604-5754 bp Feature: domain Description: rve Location: 5604-5754 bp Feature: gene Location: 6637-7785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6898-7336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6898-73 3 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), RVT-GII

Seq: PMQB01000500.1 Bryobacterales bacterium isolate bog_105 73.20110600_S1S.25_contig_51045, whole genome shotgun sequence (6993 bp)
Overview 1 RT 1: 3296-6992 bp Neighborhood of RT #1 [3296, 6991] SGNH_hydrolase_like_4 ComEA RVT-Retrons PQQ_ABC_repeats PQQ_ABC_repeats PQQ_ABC_repeats Feature: gene Location: 3296-4033 bp Feature: domain Description: SGNH_hydrolase_like_4 Location: 3488-4001 bp Feature: domain Description: SGNH_hydrolase_like_4 Location: 34 88-4 001 bp Feature: gene Location: 4030-4473 bp Feature: domain Description: ComEA Location: 4288-4468 bp Feature: domain Description: ComEA Location: 4 288-4 4 68 bp Feature: gene Location: 4671-5972 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5127-5745 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5127-574 5 bp Feature: gene Location: 5969-6991 bp Feature: domain Description: PQQ_ABC_repeats Location: 6044-6293 bp Feature: domain Description: PQQ_ABC_repeats Location: 604 4 -6293 bp Feature: domain Description: PQQ_ABC_repeats Location: 6605-6785 bp Feature: domain Description: PQQ_ABC_repeats Location: 6605-6785 bp Feature: domain Description: PQQ_ABC_repeats Location: 6809-6992 bp Feature: domain Description: PQQ_ABC_repeats Location: 6809-6992 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SGNH_hydrolase_like_4 (cd04501), ComEA (COG1555), RVT-Retrons, PQQ_ABC_repeats (TIGR03866)