myRT

myRT report for GCA_003169775.1_20110800_P1D

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Seq: PNAO01000170.1 Verrucomicrobia subdivision 3 bacterium isolate palsa_1394 73.20110800_P1D.66_contig_12493, whole genome shotgun sequence (20871 bp)
Overview 1 RT 1: 1947-7650 bp Neighborhood of RT #1 [1947, 7712] KOG3698 KOG3698 KOG3698 RVT-UG7 CelB SAF_AH_GD Feature: gene Location: 1947-2693 bp Feature: domain Description: KOG3698 Location: 2091-2685 bp Feature: domain Description: KOG3698 Location: 2091 -2685 bp Feature: gene Location: 2575-3942 bp Feature: domain Description: KOG3698 Location: 2587-3439 bp Feature: domain Description: KOG3698 Location: 2587-3439 bp Feature: domain Description: KOG3698 Location: 3496-3898 bp Feature: domain Description: KOG3698 Location: 3496-3898 bp Feature: gene Location: 4049-5572 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 4427-4850 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 4427-4850 bp Feature: gene Location: 5784-7121 bp Feature: domain Description: CelB Location: 5871-7110 bp Feature: domain Description: CelB Location: 5871 -71 1 0 bp Feature: gene Location: 7368-7712 bp Feature: domain Description: SAF_AH_GD Location: 7416-7650 bp Feature: domain Description: SAF_AH_GD Location: 741 6-7650 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG3698 (KOG3698, Hyaluronoglucosaminidase ), RVT-UG7, CelB (COG1455), SAF_AH_GD (cd11613)

Seq: PNAO01000328.1 Verrucomicrobia subdivision 3 bacterium isolate palsa_1394 73.20110800_P1D.66_contig_60727, whole genome shotgun sequence (14251 bp)
Overview 1 RT 1: 1-5265 bp Neighborhood of RT #1 [1, 5265] RVT-GII GIIM VWA_3 Feature: gene Location: 1-228 bp Feature: gene Location: 289-1071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292-550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 92 -550 bp Feature: domain Description: GIIM Note: maturase Location: 607-835 bp Feature: domain Description: GIIM Note: maturase Location: 607-835 bp Feature: gene Location: 1501-2550 bp Feature: domain Description: VWA_3 Location: 1609-2053 bp Feature: domain Description: VWA_3 Location: 1609-2 053 bp Feature: gene Location: 2572-5265 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), VWA_3 (pfam13768)