myRT

myRT report for GCA_003170115.1_20110800_E3D

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Seq: PMZS01000007.1 Spirochaetaceae bacterium isolate fen_1364 73.20110800_E3D.78_contig_58240, whole genome shotgun sequence (7957 bp)
Overview 1 RT 1: 1-7843 bp Neighborhood of RT #1 [1, 7905] RVT-GII COG4249 YfmG F5_F8_type_C CE4_NodB_like_6s_7s RVT-GII GIIM ANK Ank_5 Feature: gene Location: 1-795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271-775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271 -775 bp Feature: gene Location: 1016-1357 bp Feature: gene Location: 1557-3815 bp Feature: domain Description: COG4249 Location: 1644-2274 bp Feature: domain Description: COG4249 Location: 1 644-2274 bp Feature: domain Description: YfmG Location: 2535-3360 bp Feature: domain Description: YfmG Location: 2535-3360 bp Feature: domain Description: F5_F8_type_C Location: 3402-3678 bp Feature: domain Description: F5_F8_type_C Location: 3402-3678 bp Feature: gene Location: 3848-4579 bp Feature: domain Description: CE4_NodB_like_6s_7s Location: 3932-4490 bp Feature: domain Description: CE4_NodB_like_6s_7s Location: 3932-4490 bp Feature: gene Location: 4815-5006 bp Feature: gene Location: 5011-6030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5014-5611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 501 4-561 1 bp Feature: domain Description: GIIM Note: maturase Location: 5665-5881 bp Feature: domain Description: GIIM Note: maturase Location: 5665-5881 bp Feature: gene Location: 6340-6924 bp Feature: gene Location: 7252-7905 bp Feature: domain Description: ANK Location: 7342-7654 bp Feature: domain Description: ANK Location: 7342-7654 bp Feature: domain Description: Ank_5 Location: 7678-7843 bp Feature: domain Description: Ank_5 Location: 7678-7843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4249 (Uncharacterized protein, contains caspase domain ), YfmG (COG1262), F5_F8_type_C (pfam00754), RVT-GII, CE4_NodB_like_6s_7s (cd10917), GIIM (pfam08388), ANK (smart00248), Ank_5 (pfam13857)