myRT

myRT report for GCA_003170715.1_20110800_E2M

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Seq: PMYT01000026.1 Acidimicrobiaceae bacterium isolate fen_547 73.20110800_E2M.22_contig_37084, whole genome shotgun sequence (3381 bp)
Overview 1 RT 1: 3-2884 bp Neighborhood of RT #1 [3, 2884] RVT-GII PinE Zn_ribbon_recom HTH_MerR-trunc HTH_17 Feature: gene Location: 3-146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-1 47 bp Feature: gene Location: 190-2466 bp Feature: domain Description: PinE Location: 244-829 bp Feature: domain Description: PinE Location: 244-829 bp Feature: domain Description: Zn_ribbon_recom Location: 1177-1345 bp Feature: domain Description: Zn_ribbon_recom Location: 1 1 77-1 345 bp Feature: domain Description: HTH_MerR-trunc Location: 2032-2128 bp Feature: domain Description: HTH_MerR-trunc Location: 2032-21 28 bp Feature: domain Description: HTH_17 Location: 2242-2338 bp Feature: domain Description: HTH_1 7 Location: 2242-2338 bp Feature: gene Location: 2534-2884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), Zn_ribbon_recom (pfam13408), HTH_MerR-trunc (cd04762), HTH_17 (pfam12728), RVT-GII

Seq: PMYT01000219.1 Acidimicrobiaceae bacterium isolate fen_547 73.20110800_E2M.22_contig_6128, whole genome shotgun sequence (11095 bp)
Overview 1 RT 1: 1236-6146 bp Neighborhood of RT #1 [1236, 6146] rve_3 RVT-GII GIIM HTH_Hin_like HTH_Hin_like Feature: gene Location: 1236-1544 bp Feature: domain Description: rve_3 Location: 1257-1434 bp Feature: domain Description: rve_3 Location: 12 57-1434 bp Feature: gene Location: 1728-1871 bp Feature: gene Location: 2214-3467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2430-3090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 430-3090 bp Feature: domain Description: GIIM Note: maturase Location: 3171-3393 bp Feature: domain Description: GIIM Note: maturase Location: 3171-3393 bp Feature: gene Location: 3579-5714 bp Feature: domain Description: HTH_Hin_like Location: 3732-3819 bp Feature: domain Description: HTH_Hin_like Location: 3732 -3819 bp Feature: domain Description: HTH_Hin_like Location: 3882-3999 bp Feature: domain Description: HTH_Hin_like Location: 3882 -3999 bp Feature: gene Location: 5826-6146 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve_3 (pfam13683), RVT-GII, GIIM (pfam08388), HTH_Hin_like (cd00569)