myRT

myRT report for GCA_003170855.1_20110800_E2D

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Seq: PMYI01000206.1 Chloroflexi bacterium isolate fen_1028 73.20110800_E2D.51_contig_29998, whole genome shotgun sequence (15659 bp)
Overview 1 RT 1: 4799-10512 bp Neighborhood of RT #1 [4799, 10652] RVT-UG22 N6_N4_Mtase Mrr_cat Feature: gene Location: 4799-6115 bp Feature: gene Location: 6164-6532 bp Feature: gene Location: 7099-8607 bp Feature: RT Description: RVT-UG22 Note: UG22 RT Location: 7321-7852 bp Feature: RT Description: RVT-UG22 Note: UG22 RT Location: 7321 -7852 bp Feature: gene Location: 8370-9188 bp Feature: gene Location: 9390-10652 bp Feature: domain Description: N6_N4_Mtase Location: 9477-10128 bp Feature: domain Description: N6_N4_Mtase Location: 9477-1 01 28 bp Feature: domain Description: Mrr_cat Location: 10203-10512 bp Feature: domain Description: Mrr_cat Location: 1 0203-1 051 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG22, N6_N4_Mtase (pfam01555), Mrr_cat (pfam04471)

Seq: PMYI01000234.1 Chloroflexi bacterium isolate fen_1028 73.20110800_E2D.51_contig_79021, whole genome shotgun sequence (7676 bp)
Overview 1 RT 1: 1-5309 bp Neighborhood of RT #1 [1, 5395] DDE_Tnp_1_4 RVT-GII GIIM couple_hipB Feature: gene Location: 1-1173 bp Feature: domain Description: DDE_Tnp_1_4 Location: 4-625 bp Feature: domain Description: DDE_Tnp_1_4 Location: 4-62 5 bp Feature: gene Location: 1275-2588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1569-2205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1569-2 2 05 bp Feature: domain Description: GIIM Note: maturase Location: 2286-2499 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 86-2 499 bp Feature: gene Location: 3513-4733 bp Feature: gene Location: 5117-5395 bp Feature: domain Description: couple_hipB Location: 5147-5309 bp Feature: domain Description: couple_hipB Location: 5147-5309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_4 (pfam13701), RVT-GII, GIIM (pfam08388), couple_hipB (TIGR03070)