myRT

myRT report for GCA_003171295.1_20110800_E2D

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Seq: PMYF01000934.1 Acidobacteria bacterium isolate fen_180 73.20110800_E2D.41_contig_11061, whole genome shotgun sequence (27874 bp)
Overview 1 RT 1: 13653-17801 bp Neighborhood of RT #1 [13653, 17944] RVT-GII RVT-GII GIIM GIIM Feature: gene Location: 13653-13961 bp Feature: gene Location: 14067-14831 bp Feature: gene Location: 14701-15396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15037-15265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5037-1 5265 bp Feature: gene Location: 15994-17196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16210-16840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 621 0-1 6840 bp Feature: domain Description: GIIM Note: maturase Location: 16915-17116 bp Feature: domain Description: GIIM Note: maturase Location: 1 691 5-1 71 1 6 bp Feature: gene Location: 17380-17625 bp Feature: gene Location: 17633-17944 bp Feature: domain Description: GIIM Note: maturase Location: 17639-17801 bp Feature: domain Description: GIIM Note: maturase Location: 1 7639-1 7801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PMYF01000930.1 Acidobacteria bacterium isolate fen_180 73.20110800_E2D.41_contig_11572, whole genome shotgun sequence (2924 bp)
Overview 1 RT 1: 328-1758 bp Neighborhood of RT #1 [328, 1758] RVT-GII RVT-GII GIIM Feature: gene Location: 328-585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331-535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331-535 bp Feature: gene Location: 593-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 602-716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 602 -716 bp Feature: domain Description: GIIM Note: maturase Location: 791-1007 bp Feature: domain Description: GIIM Note: maturase Location: 791-1007 bp Feature: gene Location: 1313-1588 bp Feature: gene Location: 1594-1758 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PMYF01000094.1 Acidobacteria bacterium isolate fen_180 73.20110800_E2D.41_contig_13762, whole genome shotgun sequence (6001 bp)
Overview 1 RT 1: 2295-5057 bp Neighborhood of RT #1 [2295, 5057] RVT-GII GIIM Feature: gene Location: 2295-2501 bp Feature: gene Location: 2683-2895 bp Feature: gene Location: 3380-4690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3665-4307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 665-43 07 bp Feature: domain Description: GIIM Note: maturase Location: 4379-4601 bp Feature: domain Description: GIIM Note: maturase Location: 43 79-4601 bp Feature: gene Location: 4740-4868 bp Feature: gene Location: 4893-5057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PMYF01000641.1 Acidobacteria bacterium isolate fen_180 73.20110800_E2D.41_contig_13830, whole genome shotgun sequence (31144 bp)
Overview 1 RT 1: 1-5490 bp Neighborhood of RT #1 [1, 5600] RVT-GII GIIM Glyco_hydro_42 DUF4832 DUF4832 Feature: gene Location: 1-801 bp Feature: gene Location: 902-1144 bp Feature: gene Location: 1381-1971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1390-1579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1390-1579 bp Feature: domain Description: GIIM Note: maturase Location: 1651-1873 bp Feature: domain Description: GIIM Note: maturase Location: 1651-1873 bp Feature: gene Location: 2214-3782 bp Feature: domain Description: Glyco_hydro_42 Location: 2499-2808 bp Feature: domain Description: Glyco_hydro_4 2 Location: 24 99-2808 bp Feature: domain Description: DUF4832 Location: 3360-3660 bp Feature: domain Description: DUF4 832 Location: 3360-3660 bp Feature: gene Location: 4041-5600 bp Feature: domain Description: DUF4832 Location: 5178-5490 bp Feature: domain Description: DUF4 832 Location: 5178-54 90 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Glyco_hydro_42 (pfam02449), DUF4832 (pfam16116)

Seq: PMYF01000245.1 Acidobacteria bacterium isolate fen_180 73.20110800_E2D.41_contig_15833, whole genome shotgun sequence (12940 bp)
Overview 1 RT 1: 1292-5666 bp Neighborhood of RT #1 [1292, 5666] Resolvase Recombinase Zn_ribbon_recom KOG1924 RVT-GII GIIM Feature: gene Location: 1292-1639 bp Feature: gene Location: 1640-3355 bp Feature: domain Description: Resolvase Location: 1655-2093 bp Feature: domain Description: Resolvase Location: 165 5 -2093 bp Feature: domain Description: Recombinase Location: 2183-2543 bp Feature: domain Description: Recombinase Location: 2183-25 43 bp Feature: domain Description: Zn_ribbon_recom Location: 2582-2771 bp Feature: domain Description: Zn_ribbon_recom Location: 25 82-2771 bp Feature: domain Description: KOG1924 Location: 2873-3275 bp Feature: domain Description: KOG1924 Location: 2873-3275 bp Feature: gene Location: 3363-3926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3372-3588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3372-35 88 bp Feature: domain Description: GIIM Note: maturase Location: 3666-3792 bp Feature: domain Description: GIIM Note: maturase Location: 3666-3792 bp Feature: gene Location: 4319-4471 bp Feature: gene Location: 5145-5666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), KOG1924 (KOG1924, RhoA GTPase effector DIA/Diaphanous ), RVT-GII, GIIM (pfam08388)

Seq: PMYF01000939.1 Acidobacteria bacterium isolate fen_180 73.20110800_E2D.41_contig_28520, whole genome shotgun sequence (4057 bp)
Overview 1 RT 1: 383-3235 bp Neighborhood of RT #1 [383, 3235] RVT-GII GIIM RVT-GII Feature: gene Location: 383-1225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 389-851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 389-851 bp Feature: domain Description: GIIM Note: maturase Location: 929-1127 bp Feature: domain Description: GIIM Note: maturase Location: 929-1127 bp Feature: gene Location: 1271-1777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1625-1775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16 25-1775 bp Feature: gene Location: 443-2545 bp Feature: gene Location: 2612-3235 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PMYF01000213.1 Acidobacteria bacterium isolate fen_180 73.20110800_E2D.41_contig_31363, whole genome shotgun sequence (2619 bp)
Overview 1 RT 1: 665-2615 bp Neighborhood of RT #1 [665, 2617] TPR_16 TPR_16 RVT-GII Feature: gene Location: 665-1273 bp Feature: domain Description: TPR_16 Location: 689-842 bp Feature: domain Description: TPR_16 Location: 689-842 bp Feature: domain Description: TPR_16 Location: 1010-1223 bp Feature: domain Description: TPR_16 Location: 1010-1223 bp Feature: gene Location: 1682-2617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2027-2615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2027 -2615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR_16 (pfam13432), RVT-GII

Seq: PMYF01000195.1 Acidobacteria bacterium isolate fen_180 73.20110800_E2D.41_contig_37402, whole genome shotgun sequence (4676 bp)
Overview 1 RT 1: 74-4351 bp Neighborhood of RT #1 [74, 4351] RVT-GII GIIM RVT-GII GIIM RVT-GII Feature: gene Location: 74-1381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 359-998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 359-998 bp Feature: domain Description: GIIM Note: maturase Location: 1073-1298 bp Feature: domain Description: GIIM Note: maturase Location: 1073-1298 bp Feature: gene Location: 1580-1738 bp Feature: gene Location: 1952-2848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2060-2483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2060-248 3 bp Feature: domain Description: GIIM Note: maturase Location: 2561-2756 bp Feature: domain Description: GIIM Note: maturase Location: 2561-2756 bp Feature: gene Location: 2863-4161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3118-3811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3118 -38 11 bp Feature: gene Location: 4064-4351 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PMYF01000806.1 Acidobacteria bacterium isolate fen_180 73.20110800_E2D.41_contig_49503, whole genome shotgun sequence (8127 bp)
Overview 1 RT 1: 3-3195 bp Neighborhood of RT #1 [3, 3386] RVT-GII Phage_int_SAM_4 INT_IntI_C Zn_Tnp_IS91 Y2_Tnp Feature: gene Location: 3-938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 348-936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 348-9 36 bp Feature: gene Location: 1315-2211 bp Feature: domain Description: Phage_int_SAM_4 Location: 1327-1564 bp Feature: domain Description: Phage_int_SAM_4 Location: 1327-1564 bp Feature: domain Description: INT_IntI_C Location: 1609-2110 bp Feature: domain Description: INT_IntI_C Location: 1609 -2110 bp Feature: gene Location: 2208-3386 bp Feature: domain Description: Zn_Tnp_IS91 Location: 2259-2514 bp Feature: domain Description: Zn_Tnp_IS9 1 Location: 2259 -2514 bp Feature: domain Description: Y2_Tnp Location: 2640-3195 bp Feature: domain Description: Y2_Tnp Location: 2640-319 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Phage_int_SAM_4 (pfam13495), INT_IntI_C (cd01193), Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986)

Seq: PMYF01000250.1 Acidobacteria bacterium isolate fen_180 73.20110800_E2D.41_contig_5199, whole genome shotgun sequence (13465 bp)
Overview 1 RT 1: 6583-12735 bp Neighborhood of RT #1 [6583, 12740] MttB2 RVT-GII GIIM PRK09124 Feature: gene Location: 6583-8016 bp Feature: domain Description: MttB2 Location: 6598-8005 bp Feature: domain Description: MttB2 Location: 6598-8005 bp Feature: gene Location: 8322-8465 bp Feature: gene Location: 8503-9873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8800-9433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8800-9433 bp Feature: domain Description: GIIM Note: maturase Location: 9514-9712 bp Feature: domain Description: GIIM Note: maturase Location: 9514-9712 bp Feature: gene Location: 10199-10417 bp Feature: gene Location: 11019-12740 bp Feature: domain Description: PRK09124 Location: 11031-12735 bp Feature: domain Description: PRK09124 Location: 110 31-12735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MttB2 (COG5598), RVT-GII, GIIM (pfam08388), PRK09124 (ubiquinone-dependent pyruvate dehydrogenase)

Seq: PMYF01000919.1 Acidobacteria bacterium isolate fen_180 73.20110800_E2D.41_contig_5200, whole genome shotgun sequence (11620 bp)
Overview 1 RT 1: 85-2342 bp Neighborhood of RT #1 [85, 2782] RVT-GII GIIM AbiEi_4 Feature: gene Location: 85-1455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382-1015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382-1015 bp Feature: domain Description: GIIM Note: maturase Location: 1096-1294 bp Feature: domain Description: GIIM Note: maturase Location: 1096-1294 bp Feature: gene Location: 1486-1698 bp Feature: gene Location: 2174-2782 bp Feature: domain Description: AbiEi_4 Location: 2282-2342 bp Feature: domain Description: AbiEi_4 Location: 2282-2342 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), AbiEi_4 (pfam13338)

Seq: PMYF01000083.1 Acidobacteria bacterium isolate fen_180 73.20110800_E2D.41_contig_9118, whole genome shotgun sequence (2574 bp)
Overview 1 RT 1: 3-2134 bp Neighborhood of RT #1 [3, 2310] DEDD_Tnp_IS110 RVT-GII GIIM Feature: gene Location: 3-278 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 30-255 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 30-255 bp Feature: gene Location: 916-2310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1246-1864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 46-1864 bp Feature: domain Description: GIIM Note: maturase Location: 1915-2134 bp Feature: domain Description: GIIM Note: maturase Location: 1915-2134 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEDD_Tnp_IS110 (pfam01548), RVT-GII, GIIM (pfam08388)