myRT

myRT report for GCA_003172935.1_ASM317293v1

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Seq: QGKS01000105.1 Micromonospora sp. 4G51 NODE_152_length_17613_cov_10.914_ID_303, whole genome shotgun sequence (17613 bp)
Overview 1 RT 1: 13667-16901 bp Neighborhood of RT #1 [13667, 16966] Methyltransf_25 MFS_MefA_like RVT-GII GIIM Feature: gene Location: 13667-14434 bp Feature: domain Description: Methyltransf_25 Location: 13802-14078 bp Feature: domain Description: Methyltransf_25 Location: 1 3802-1 4078 bp Feature: gene Location: 14491-16038 bp Feature: domain Description: MFS_MefA_like Location: 14773-15904 bp Feature: domain Description: MFS_MefA_like Location: 1 4773-1 5904 bp Feature: gene Location: 16217-16966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16223-16589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6223-1 6589 bp Feature: domain Description: GIIM Note: maturase Location: 16670-16901 bp Feature: domain Description: GIIM Note: maturase Location: 1 6670-1 6901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Methyltransf_25 (pfam13649), MFS_MefA_like (cd06173), RVT-GII, GIIM (pfam08388)

Seq: QGKS01000211.1 Micromonospora sp. 4G51 NODE_23_length_51353_cov_10.8561_ID_45, whole genome shotgun sequence (51353 bp)
Overview 1 RT 1: 37696-48564 bp Neighborhood of RT #1 [37696, 48599] DnrI XkdP DnrI RVT_N RVT-GII GIIM DUF2637 HTH_Tnp_4 DDE_Tnp_4 Feature: gene Location: 37696-39819 bp Feature: domain Description: DnrI Location: 39097-39775 bp Feature: domain Description: DnrI Location: 39097-39775 bp Feature: gene Location: 40121-43303 bp Feature: domain Description: XkdP Location: 40574-40811 bp Feature: domain Description: XkdP Location: 40574-40811 bp Feature: domain Description: DnrI Location: 42533-43265 bp Feature: domain Description: DnrI Location: 42 533-432 65 bp Feature: gene Location: 43557-45347 bp Feature: RT Description: RVT_N Location: 43644-43881 bp Feature: RT Description: RVT_N Location: 43644-43881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43941-44604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43941-44604 bp Feature: domain Description: GIIM Note: maturase Location: 44661-44895 bp Feature: domain Description: GIIM Note: maturase Location: 44661-44895 bp Feature: gene Location: 45995-47020 bp Feature: domain Description: DUF2637 Location: 46139-46331 bp Feature: domain Description: DUF2 637 Location: 46139-46331 bp Feature: gene Location: 47757-48599 bp Feature: domain Description: HTH_Tnp_4 Location: 47868-48018 bp Feature: domain Description: HTH_Tnp_4 Location: 47868-48018 bp Feature: domain Description: DDE_Tnp_4 Location: 48138-48564 bp Feature: domain Description: DDE_Tnp_4 Location: 48138-48564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DnrI (COG3629), XkdP (COG1652), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF2637 (pfam10935), HTH_Tnp_4 (pfam13613), DDE_Tnp_4 (pfam13359)

Seq: QGKS01000531.1 Micromonospora sp. 4G51 NODE_444_length_2232_cov_26.5235_ID_887, whole genome shotgun sequence (2232 bp)
Overview 1 RT 1: 555-1917 bp Neighborhood of RT #1 [555, 2114] RVT-GII GIIM Feature: gene Location: 555-2114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 927-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 927-1614 bp Feature: domain Description: GIIM Note: maturase Location: 1683-1917 bp Feature: domain Description: GIIM Note: maturase Location: 1683 -1917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QGKS01000461.1 Micromonospora sp. 4G51 NODE_455_length_1897_cov_17.9418_ID_909, whole genome shotgun sequence (1897 bp)
Overview 1 RT 1: 45-1863 bp Neighborhood of RT #1 [45, 1895] RVT-GII Feature: gene Location: 45-239 bp Feature: gene Location: 242-388 bp Feature: gene Location: 1035-1895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1251-1863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1251-1863 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QGKS01000538.1 Micromonospora sp. 4G51 NODE_461_length_1677_cov_27.2258_ID_921, whole genome shotgun sequence (1677 bp)
Overview 1 RT 1: 83-1232 bp Neighborhood of RT #1 [83, 1675] RVT_N RVT-GII GIIM Feature: gene Location: 83-1675 bp Feature: RT Description: RVT_N Location: 89-233 bp Feature: RT Description: RVT_N Location: 89-233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 293-947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 293-947 bp Feature: domain Description: GIIM Note: maturase Location: 998-1232 bp Feature: domain Description: GIIM Note: maturase Location: 998-1232 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: QGKS01000037.1 Micromonospora sp. 4G51 NODE_484_length_1262_cov_24.9833_ID_967, whole genome shotgun sequence (1262 bp)
Overview 1 RT 1: 128-692 bp Neighborhood of RT #1 [128, 712] RVT-GII Feature: gene Location: 128-712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131-692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131-6 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QGKS01000026.1 Micromonospora sp. 4G51 NODE_505_length_851_cov_11.0787_ID_1009, whole genome shotgun sequence (851 bp)
Overview 1 RT 1: 2-707 bp Neighborhood of RT #1 [2, 706] RVT-GII Feature: gene Location: 2-706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 218-707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 218-7 07 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QGKS01000010.1 Micromonospora sp. 4G51 NODE_530_length_605_cov_43.182_ID_1059, whole genome shotgun sequence (605 bp)
Overview 1 RT 1: 88-538 bp Neighborhood of RT #1 [88, 603] RVT-GII GIIM Feature: gene Location: 88-603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94-226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94-226 bp Feature: domain Description: GIIM Note: maturase Location: 307-538 bp Feature: domain Description: GIIM Note: maturase Location: 307-538 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QGKS01000226.1 Micromonospora sp. 4G51 NODE_53_length_36042_cov_11.559_ID_105, whole genome shotgun sequence (36042 bp)
Overview 1 RT 1: 27397-32814 bp Neighborhood of RT #1 [27397, 33479] RVT-GII GIIM HTH_31 Feature: gene Location: 27397-27576 bp Feature: gene Location: 27573-27818 bp Feature: gene Location: 27946-29373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28267-28951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28267-289 51 bp Feature: domain Description: GIIM Note: maturase Location: 29023-29251 bp Feature: domain Description: GIIM Note: maturase Location: 29 023-29 251 bp Feature: gene Location: 30954-31547 bp Feature: gene Location: 32625-33479 bp Feature: domain Description: HTH_31 Location: 32640-32814 bp Feature: domain Description: HTH_31 Location: 32640-32814 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_31 (pfam13560)

Seq: QGKS01000163.1 Micromonospora sp. 4G51 NODE_68_length_31704_cov_16.3042_ID_135, whole genome shotgun sequence (31704 bp)
Overview 1 RT 1: 27939-31682 bp Neighborhood of RT #1 [27939, 31702] HTH_HspR SpoIIE RVT-GII GIIM Tra8 Feature: gene Location: 27939-28238 bp Feature: domain Description: HTH_HspR Location: 27987-28233 bp Feature: domain Description: HTH_HspR Location: 27987-28233 bp Feature: gene Location: 29083-29397 bp Feature: domain Description: SpoIIE Location: 29086-29320 bp Feature: domain Description: SpoIIE Location: 29086-29320 bp Feature: gene Location: 29744-30889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29852-30512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29852-30512 bp Feature: domain Description: GIIM Note: maturase Location: 30596-30812 bp Feature: domain Description: GIIM Note: maturase Location: 30596-30812 bp Feature: gene Location: 31478-31702 bp Feature: domain Description: Tra8 Location: 31481-31682 bp Feature: domain Description: Tra8 Location: 31481-31682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_HspR (cd04766), SpoIIE (pfam07228), RVT-GII, GIIM (pfam08388), Tra8 (COG2826)