myRT

myRT report for GCA_003175495.1_ASM317549v1

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Seq: BGKW01000001.1 Proteus mirabilis TUM11571 DNA, sequence001, whole genome shotgun sequence (347186 bp)
Overview 1 RT 1: 266233-275477 bp Neighborhood of RT #1 [266233, 275815] TIGR02646 COG3950 RVT-Retrons PRK10263 COG0610 Feature: gene Location: 266233-266874 bp Feature: domain Description: TIGR02646 Location: 266302-266725 bp Feature: domain Description: TIGR02646 Location: 266302-266725 bp Feature: gene Location: 266883-268559 bp Feature: domain Description: COG3950 Location: 267132-268545 bp Feature: domain Description: COG3950 Location: 2671 32-268545 bp Feature: gene Location: 268556-269470 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 268655-269234 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 268655-269234 bp Feature: gene Location: 270956-272392 bp Feature: domain Description: PRK10263 Location: 271013-272378 bp Feature: domain Description: PRK1 0263 Location: 271 01 3-272378 bp Feature: gene Location: 272462-275815 bp Feature: domain Description: COG0610 Location: 272594-275477 bp Feature: domain Description: COG061 0 Location: 272594-275477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK10263 (DNA translocase FtsK; Provisional), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases )

Seq: BGKW01000005.1 Proteus mirabilis TUM11571 DNA, sequence005, whole genome shotgun sequence (215614 bp)
Overview 1 RT 1: 115715-122912 bp Neighborhood of RT #1 [115715, 122920] YqiC ABC_ATPase ABC_ATPase RVT-Retrons PRK11316 PRK11072 Feature: gene Location: 115715-116029 bp Feature: domain Description: YqiC Location: 115718-115970 bp Feature: domain Description: YqiC Location: 115718-115970 bp Feature: gene Location: 116090-117397 bp Feature: domain Description: ABC_ATPase Location: 116138-116237 bp Feature: domain Description: ABC_ATPase Location: 116138-1162 37 bp Feature: domain Description: ABC_ATPase Location: 116627-116819 bp Feature: domain Description: ABC_ATPase Location: 11662 7-116819 bp Feature: gene Location: 117397-118350 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 117517-118078 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 117517-118078 bp Feature: gene Location: 118561-120030 bp Feature: domain Description: PRK11316 Location: 118609-120025 bp Feature: domain Description: PRK11316 Location: 118609-12 002 5 bp Feature: gene Location: 120086-122920 bp Feature: domain Description: PRK11072 Location: 120101-122912 bp Feature: domain Description: PRK11072 Location: 12 0101-12 2 912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqiC (COG2960), ABC_ATPase (pfam09818), RVT-Retrons, PRK11316 (bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE), PRK11072 (bifunctional adenylyltransferase)

Seq: BGKW01000024.1 Proteus mirabilis TUM11571 DNA, sequence024, whole genome shotgun sequence (54079 bp)
Overview 1 RT 1: 7611-11783 bp Neighborhood of RT #1 [7611, 11797] DEDD_Tnp_IS110 COG3547 PHA02517 RVT-GII InsE PHA02517 Feature: gene Location: 7611-8963 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 7668-8097 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 7668-8097 bp Feature: domain Description: COG3547 Location: 8496-8808 bp Feature: domain Description: COG3 547 Location: 8496-8808 bp Feature: gene Location: 9057-9467 bp Feature: domain Description: PHA02517 Location: 9063-9402 bp Feature: domain Description: PHA02517 Location: 9063 -9402 bp Feature: gene Location: 10059-10637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10332-10584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 3 2-10584 bp Feature: gene Location: 10653-10940 bp Feature: domain Description: InsE Location: 10659-10932 bp Feature: domain Description: InsE Location: 10659-1093 2 bp Feature: gene Location: 11000-11797 bp Feature: domain Description: PHA02517 Location: 11003-11783 bp Feature: domain Description: PHA02517 Location: 11003 -11783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), DEDD_Tnp_IS110 (pfam01548), COG3547 (Transposase )