myRT

myRT report for GCA_003175655.1_ASM317565v1

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Seq: BGLE01000006.1 Escherichia coli TUM14675 DNA, sequence006, whole genome shotgun sequence (168259 bp)
Overview 1 RT 1: 137962-142253 bp Neighborhood of RT #1 [137962, 142253] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 137962-139224 bp Feature: domain Description: YesM Location: 138475-139216 bp Feature: domain Description: YesM Location: 1 38475-1 3921 6 bp Feature: gene Location: 139254-139424 bp Feature: gene Location: 139774-140295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 139780-140062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 39780-1 40062 bp Feature: domain Description: GIIM Note: maturase Location: 140110-140290 bp Feature: domain Description: GIIM Note: maturase Location: 1 401 1 0-1 40290 bp Feature: gene Location: 140323-140862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 140653-140731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 40653-1 40731 bp Feature: gene Location: 140893-141090 bp Feature: gene Location: 141348-142253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: BGLE01000007.1 Escherichia coli TUM14675 DNA, sequence007, whole genome shotgun sequence (162993 bp)
Overview 1 RT 1: 127748-133779 bp Neighborhood of RT #1 [127748, 133779] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 127748-128668 bp Feature: domain Description: AbiEii Location: 127790-128531 bp Feature: domain Description: AbiEii Location: 12 7790-12 8531 bp Feature: gene Location: 128655-129458 bp Feature: domain Description: AbiEi_3_N Location: 128688-128949 bp Feature: domain Description: AbiEi_3_N Location: 12 8688-12 8949 bp Feature: domain Description: AbiEi_3 Location: 128961-129417 bp Feature: domain Description: AbiEi_3 Location: 12 8961-12 9417 bp Feature: gene Location: 129753-132962 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 130281-130770 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1302 81-130770 bp Feature: domain Description: nitrilase Location: 132276-132873 bp Feature: domain Description: nitrilase Location: 132 2 76-132 873 bp Feature: gene Location: 133123-133263 bp Feature: domain Description: Phage_ASH Location: 133150-133243 bp Feature: domain Description: Phage_ASH Location: 133150-1332 43 bp Feature: gene Location: 133309-133779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: BGLE01000096.1 Escherichia coli TUM14675 DNA, sequence096, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 0-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 173 7-193 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)