myRT

myRT report for GCA_003176215.1_ASM317621v1

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Seq: BGLN01000002.1 Escherichia coli TUM15926 DNA, sequence002, whole genome shotgun sequence (220755 bp)
Overview 1 RT 1: 207705-213397 bp Neighborhood of RT #1 [207705, 213855] InsE PHA02517 RVT-GII GIIM PHA02517 HsdM Feature: gene Location: 207705-208031 bp Feature: domain Description: InsE Location: 207708-208029 bp Feature: domain Description: InsE Location: 207708-208029 bp Feature: gene Location: 208229-208510 bp Feature: domain Description: PHA02517 Location: 208235-208445 bp Feature: domain Description: PHA0251 7 Location: 208235-208445 bp Feature: gene Location: 209102-210625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 209375-210107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 209375-21 01 07 bp Feature: domain Description: GIIM Note: maturase Location: 210182-210380 bp Feature: domain Description: GIIM Note: maturase Location: 21 01 82-21 0380 bp Feature: gene Location: 210790-211173 bp Feature: domain Description: PHA02517 Location: 210793-211168 bp Feature: domain Description: PHA0251 7 Location: 21 0793-21 1 1 68 bp Feature: gene Location: 211396-213855 bp Feature: domain Description: HsdM Location: 211453-213397 bp Feature: domain Description: HsdM Location: 21 1 453-21 3397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HsdM (COG0286)

Seq: BGLN01000039.1 Escherichia coli TUM15926 DNA, sequence039, whole genome shotgun sequence (47400 bp)
Overview 1 RT 1: 1-2368 bp Neighborhood of RT #1 [1, 2442] RVT-UG4 DDE_Tnp_IS66 Feature: gene Location: 1-198 bp Feature: gene Location: 261-1211 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 612-1056 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 612 -1056 bp Feature: gene Location: 1271-2110 bp Feature: gene Location: 2152-2442 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2188-2368 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 188-2 368 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DDE_Tnp_IS66 (pfam03050)