myRT

myRT report for GCA_003176455.1_ASM317645v1

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Seq: BGLZ01000023.1 Escherichia coli TUM3434 DNA, sequence023, whole genome shotgun sequence (52047 bp)
Overview 1 RT 1: 1-2283 bp Neighborhood of RT #1 [1, 2283] RVT-Retrons Feature: gene Location: 1-1488 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 160-778 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 60-778 bp Feature: gene Location: 1709-1852 bp Feature: gene Location: 2044-2283 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: BGLZ01000032.1 Escherichia coli TUM3434 DNA, sequence032, whole genome shotgun sequence (26026 bp)
Overview 1 RT 1: 13045-18772 bp Neighborhood of RT #1 [13045, 19014] YeeP RVT-UG1 GerD Feature: gene Location: 13045-13230 bp Feature: gene Location: 13407-14279 bp Feature: domain Description: YeeP Location: 13410-14277 bp Feature: domain Description: YeeP Location: 13410-142 77 bp Feature: gene Location: 14883-17354 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 15495-16005 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 15495-16005 bp Feature: gene Location: 17456-18571 bp Feature: gene Location: 18580-19014 bp Feature: domain Description: GerD Location: 18658-18772 bp Feature: domain Description: GerD Location: 18658-18772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeeP (COG3596), RVT-UG1, GerD (pfam17898)

Seq: BGLZ01000039.1 Escherichia coli TUM3434 DNA, sequence039, whole genome shotgun sequence (18047 bp)
Overview 1 RT 1: 3-2122 bp Neighborhood of RT #1 [3, 2122] RVT-GII GIIM PHA02517 Feature: gene Location: 3-1322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-804 bp Feature: domain Description: GIIM Note: maturase Location: 879-1077 bp Feature: domain Description: GIIM Note: maturase Location: 879-1077 bp Feature: gene Location: 1487-1870 bp Feature: domain Description: PHA02517 Location: 1490-1865 bp Feature: domain Description: PHA02517 Location: 1490-1865 bp Feature: gene Location: 1886-2122 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: BGLZ01000047.1 Escherichia coli TUM3434 DNA, sequence047, whole genome shotgun sequence (11404 bp)
Overview 1 RT 1: 3-1077 bp Neighborhood of RT #1 [3, 1085] RVT-GII PRK10173 PRK10173 Feature: gene Location: 3-302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-14 1 bp Feature: gene Location: 341-652 bp Feature: domain Description: PRK10173 Location: 344-563 bp Feature: domain Description: PRK10173 Location: 34 4 -563 bp Feature: gene Location: 636-1085 bp Feature: domain Description: PRK10173 Location: 639-1077 bp Feature: domain Description: PRK10173 Location: 639-1077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: BGLZ01000104.1 Escherichia coli TUM3434 DNA, sequence104, whole genome shotgun sequence (985 bp)
Overview 1 RT 1: 3-982 bp Neighborhood of RT #1 [3, 982] RVT-GII Feature: gene Location: 3-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: gene Location: 623-982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII