myRT

myRT report for GCA_003181615.1_ASM318161v1

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Seq: PJSQ01000001.1 Clostridium perfringens strain Pennington scaffold_0, whole genome shotgun sequence (1160668 bp)
Overview 1 RT 1: 117895-125547 bp Neighborhood of RT #1 [117895, 125657] Trypsin_2 ComEC ComEC RVT-GII Intron_maturas2 PRK09219 TPR TPR Feature: gene Location: 117895-119250 bp Feature: domain Description: Trypsin_2 Location: 117973-118462 bp Feature: domain Description: Trypsin_2 Location: 1 1 7973-1 1 8462 bp Feature: gene Location: 119251-120213 bp Feature: domain Description: ComEC Location: 119317-119521 bp Feature: domain Description: ComEC Location: 1 1 931 7-1 1 9521 bp Feature: domain Description: ComEC Location: 119794-120019 bp Feature: domain Description: ComEC Location: 1 1 9794-1 2001 9 bp Feature: gene Location: 120599-122383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120863-121682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 20863-1 21 682 bp Feature: domain Description: Intron_maturas2 Location: 121763-122105 bp Feature: domain Description: Intron_maturas2 Location: 1 21 763-1 221 05 bp Feature: gene Location: 123917-124495 bp Feature: domain Description: PRK09219 Location: 123920-124493 bp Feature: domain Description: PRK0921 9 Location: 1 23920-1 24493 bp Feature: gene Location: 124668-125657 bp Feature: domain Description: TPR Location: 124860-125142 bp Feature: domain Description: TPR Location: 1 24860-1 251 42 bp Feature: domain Description: TPR Location: 125304-125547 bp Feature: domain Description: TPR Location: 1 25304-1 25547 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Trypsin_2 (pfam13365), ComEC (COG2333), RVT-GII, Intron_maturas2 (pfam01348), PRK09219 (xanthine phosphoribosyltransferase; Validated), TPR (smart00028)

Seq: PJSQ01000014.1 Clostridium perfringens strain Pennington scaffold_13, whole genome shotgun sequence (62979 bp)
Overview 1 RT 1: 43531-53273 bp Neighborhood of RT #1 [43531, 53380] KOG1000 RVT-GII Intron_maturas2 HNHc COG4646 RES RES Feature: gene Location: 43531-43851 bp Feature: gene Location: 43891-44862 bp Feature: domain Description: KOG1000 Location: 43951-44209 bp Feature: domain Description: KOG1000 Location: 43951-442 09 bp Feature: gene Location: 44946-46748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45213-46005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 452 13-46005 bp Feature: domain Description: Intron_maturas2 Location: 46095-46473 bp Feature: domain Description: Intron_maturas2 Location: 46095-46473 bp Feature: domain Description: HNHc Note: nucleases Location: 46548-46725 bp Feature: domain Description: HNHc Note: nucleases Location: 46548-4672 5 bp Feature: gene Location: 47316-52313 bp Feature: domain Description: COG4646 Location: 49365-51966 bp Feature: domain Description: COG4646 Location: 49365-51966 bp Feature: gene Location: 52484-53380 bp Feature: domain Description: RES Location: 52688-52844 bp Feature: domain Description: RES Location: 52 688-52 844 bp Feature: domain Description: RES Location: 53036-53273 bp Feature: domain Description: RES Location: 53036-532 73 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), COG4646 (Adenine-specific DNA methylase, N12 class ), RES (smart00953)