myRT

myRT report for GCA_003181955.1_ASM318195v1

Download annotations/find similar RTs

Seq: PJSU01000091.1 Clostridium perfringens strain NobL1 contig00091, whole genome shotgun sequence (4939 bp)
Overview 1 RT 1: 191-4937 bp Neighborhood of RT #1 [191, 4936] dnaE RVT-GII HNHc dnaE Feature: gene Location: 191-1441 bp Feature: domain Description: dnaE Location: 203-1427 bp Feature: domain Description: dnaE Location: 203-1 427 bp Feature: gene Location: 2547-4373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2862-3558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2862-3558 bp Feature: domain Description: HNHc Note: nucleases Location: 4128-4263 bp Feature: domain Description: HNHc Note: nucleases Location: 41 28-4263 bp Feature: gene Location: 4448-4936 bp Feature: domain Description: dnaE Location: 4490-4937 bp Feature: domain Description: dnaE Location: 4490-4937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaE (PRK07374), RVT-GII, HNHc (smart00507)

Seq: PJSU01000174.1 Clostridium perfringens strain NobL1 contig00174, whole genome shotgun sequence (29184 bp)
Overview 1 RT 1: 13559-18764 bp Neighborhood of RT #1 [13559, 18769] xerC RVT-GII HNHc xerC DUF3892 Feature: gene Location: 13559-13951 bp Feature: gene Location: 14042-14371 bp Feature: domain Description: xerC Location: 14066-14360 bp Feature: domain Description: xerC Location: 14066-14360 bp Feature: gene Location: 14524-16344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14824-15538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1482 4-15538 bp Feature: domain Description: HNHc Note: nucleases Location: 16099-16231 bp Feature: domain Description: HNHc Note: nucleases Location: 16099-162 31 bp Feature: gene Location: 17075-18049 bp Feature: domain Description: xerC Location: 17447-18032 bp Feature: domain Description: xerC Location: 17447-18032 bp Feature: gene Location: 18551-18769 bp Feature: domain Description: DUF3892 Location: 18566-18764 bp Feature: domain Description: DUF3892 Location: 18566-18764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT xerC (PRK01287), RVT-GII, HNHc (smart00507), DUF3892 (pfam13031)

Seq: PJSU01000205.1 Clostridium perfringens strain NobL1 contig00205, whole genome shotgun sequence (2758 bp)
Overview 1 RT 1: 145-1936 bp Neighborhood of RT #1 [145, 2013] RVT-GII HNHc Feature: gene Location: 145-2013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463 -1168 bp Feature: domain Description: HNHc Note: nucleases Location: 1771-1936 bp Feature: domain Description: HNHc Note: nucleases Location: 1771-193 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)