myRT

myRT report for GCA_003182365.1_ASM318236v1

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Seq: QGUA01000001.1 Idiomarina loihiensis strain H2.2 Ga0227262_101, whole genome shotgun sequence (433134 bp)
Overview 1 RT 1: 323948-329425 bp Neighborhood of RT #1 [323948, 329430] FGE-sulfatase Avd_like RVT-DGRs Tar Feature: gene Location: 323948-325483 bp Feature: domain Description: FGE-sulfatase Location: 324740-325175 bp Feature: domain Description: FGE-sulfatase Location: 324740-3251 75 bp Feature: gene Location: 325548-325892 bp Feature: domain Description: Avd_like Location: 325575-325881 bp Feature: domain Description: Avd_like Location: 325575-325881 bp Feature: gene Location: 325893-327209 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 326388-326997 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 326388-326997 bp Feature: gene Location: 327213-327554 bp Feature: gene Location: 327799-329430 bp Feature: domain Description: Tar Location: 328234-329425 bp Feature: domain Description: Tar Location: 328234-329425 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FGE-sulfatase (pfam03781), Avd_like (cd16376), RVT-DGRs, Tar (COG0840)

Seq: QGUA01000011.1 Idiomarina loihiensis strain H2.2 Ga0227262_111, whole genome shotgun sequence (98751 bp)
Overview 1 RT 1: 91079-96183 bp Neighborhood of RT #1 [91079, 96183] RVT-Retrons Feature: gene Location: 91079-92431 bp Feature: gene Location: 92876-93841 bp Feature: gene Location: 93843-94763 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 93945-94527 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 93945-9452 7 bp Feature: gene Location: 95144-95890 bp Feature: gene Location: 95980-96183 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: QGUA01000015.1 Idiomarina loihiensis strain H2.2 Ga0227262_115, whole genome shotgun sequence (33626 bp)
Overview 1 RT 1: 1258-6613 bp Neighborhood of RT #1 [1258, 6627] Phage_GPA RVT-Retrons PRK10815 cztS_silS_copS Feature: gene Location: 1258-2892 bp Feature: domain Description: Phage_GPA Location: 1621-2464 bp Feature: domain Description: Phage_GPA Location: 1621-2464 bp Feature: gene Location: 2967-3119 bp Feature: gene Location: 3215-4363 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3350-3905 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 3 50-3 905 bp Feature: gene Location: 4356-5015 bp Feature: gene Location: 5209-6627 bp Feature: domain Description: PRK10815 Location: 5731-6124 bp Feature: domain Description: PRK10815 Location: 573 1-6124 bp Feature: domain Description: cztS_silS_copS Location: 6196-6613 bp Feature: domain Description: cztS_silS_copS Location: 6196-6613 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-Retrons, PRK10815 (two-component system sensor histidine kinase PhoQ), cztS_silS_copS (TIGR01386)

Seq: QGUA01000024.1 Idiomarina loihiensis strain H2.2 Ga0227262_124, whole genome shotgun sequence (2278 bp)
Overview 1 RT 1: 92-1370 bp Neighborhood of RT #1 [92, 1615] RVT-GII GIIM Feature: gene Location: 92-1615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-1097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-1097 bp Feature: domain Description: GIIM Note: maturase Location: 1193-1370 bp Feature: domain Description: GIIM Note: maturase Location: 1193-1370 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)