myRT

myRT report for GCA_003182675.2_ASM318267v2

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Seq: CP027303.2 Geobacillus thermoleovorans strain SGAir0734 chromosome (3615919 bp)
Overview 1 RT 1: 41213-48650 bp 2 RT 2: 86360-89104 bp 3 RT 3: 147861-151982 bp 4 RT 4: 307749-312981 bp 5 RT 5: 358869-366623 bp 6 RT 6: 2394614-2401333 bp 7 RT 7: 2741566-2744742 bp 8 RT 8: 3131021-3133458 bp 9 RT 9: 3606537-3610077 bp Neighborhood of RT #1 [41213, 48718] COG3587 Mod RVT-GII GIIM DUF4391 Neighborhood of RT #2 [86360, 89106] CspC RVT-GII GIIM DUF2564 Neighborhood of RT #3 [147861, 151996] recA RVT-GII HNHc recA Neighborhood of RT #4 [307749, 313094] RVT-GII GIIM ileS DivIVA Neighborhood of RT #5 [358869, 366628] PRK04375 CtaA RVT-GII GIIM PycA Neighborhood of RT #6 [2394614, 2401755] vWFA BID_2 BID_2 RVT-GII GIIM PilW Neighborhood of RT #7 [2741566, 2744744] RVT-GII GIIM RsuA PRK03147 Neighborhood of RT #8 [3131021, 3133466] RVT-GII GIIM CelA CelC Neighborhood of RT #9 [3606537, 3610077] N6_N4_Mtase RVT-GII GIIM Feature: gene Location: 41213-44167 bp Feature: domain Description: COG3587 Location: 41216-44111 bp Feature: domain Description: COG3587 Location: 41 21 6-441 1 1 bp Feature: gene Location: 44171-46057 bp Feature: domain Description: Mod Location: 44288-45677 bp Feature: domain Description: Mod Location: 44288-45677 bp Feature: gene Location: 46405-47664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46603-47221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46603-47221 bp Feature: domain Description: GIIM Note: maturase Location: 47269-47488 bp Feature: domain Description: GIIM Note: maturase Location: 47269-47488 bp Feature: gene Location: 47872-48150 bp Feature: gene Location: 48152-48718 bp Feature: domain Description: DUF4391 Location: 48212-48650 bp Feature: domain Description: DUF4391 Location: 4821 2-48650 bp Feature: gene Location: 86360-86530 bp Feature: gene Location: 86620-86820 bp Feature: domain Description: CspC Location: 86623-86815 bp Feature: domain Description: CspC Location: 86623-8681 5 bp Feature: gene Location: 86930-88189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87128-87746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 871 28-87746 bp Feature: domain Description: GIIM Note: maturase Location: 87794-88007 bp Feature: domain Description: GIIM Note: maturase Location: 87794-88007 bp Feature: gene Location: 88395-88673 bp Feature: gene Location: 88837-89106 bp Feature: domain Description: DUF2564 Location: 88870-89104 bp Feature: domain Description: DUF2564 Location: 88870-891 04 bp Feature: gene Location: 147861-148049 bp Feature: gene Location: 148170-149012 bp Feature: domain Description: recA Location: 148260-148971 bp Feature: domain Description: recA Location: 1 48260-1 48971 bp Feature: gene Location: 149058-150872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149313-150024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4931 3-1 50024 bp Feature: domain Description: HNHc Note: nucleases Location: 150621-150786 bp Feature: domain Description: HNHc Note: nucleases Location: 1 50621 -1 50786 bp Feature: gene Location: 151070-151252 bp Feature: gene Location: 151691-151996 bp Feature: domain Description: recA Location: 151697-151982 bp Feature: domain Description: recA Location: 1 51 697-1 51 982 bp Feature: gene Location: 307749-307886 bp Feature: gene Location: 307951-308088 bp Feature: gene Location: 308085-309338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308277-308895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308277-308895 bp Feature: domain Description: GIIM Note: maturase Location: 308943-309156 bp Feature: domain Description: GIIM Note: maturase Location: 308943-3091 56 bp Feature: gene Location: 309412-312186 bp Feature: domain Description: ileS Location: 309415-312169 bp Feature: domain Description: ileS Location: 30941 5-31 21 69 bp Feature: gene Location: 312558-313094 bp Feature: domain Description: DivIVA Location: 312591-312981 bp Feature: domain Description: DivIVA Location: 31 2591 -31 2981 bp Feature: gene Location: 358869-359876 bp Feature: domain Description: PRK04375 Location: 359019-359871 bp Feature: domain Description: PRK04375 Location: 35901 9-359871 bp Feature: gene Location: 360137-361132 bp Feature: domain Description: CtaA Location: 360170-361076 bp Feature: domain Description: CtaA Location: 3601 70-361 076 bp Feature: gene Location: 361313-362572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 361511-362129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 361 51 1 -3621 29 bp Feature: domain Description: GIIM Note: maturase Location: 362177-362390 bp Feature: domain Description: GIIM Note: maturase Location: 3621 77-362390 bp Feature: gene Location: 362778-363056 bp Feature: gene Location: 363185-366628 bp Feature: domain Description: PycA Location: 363197-366623 bp Feature: domain Description: PycA Location: 3631 97-366623 bp Feature: gene Location: 2394614-2397496 bp Feature: domain Description: vWFA Location: 2394857-2395589 bp Feature: domain Description: vWFA Location: 2394857-2395589 bp Feature: domain Description: BID_2 Location: 2396945-2397140 bp Feature: domain Description: BID_2 Location: 2396945-23971 40 bp Feature: domain Description: BID_2 Location: 2397242-2397401 bp Feature: domain Description: BID_2 Location: 2397242-2397401 bp Feature: gene Location: 2397765-2397902 bp Feature: gene Location: 2398097-2399356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2398295-2398913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2398295-239891 3 bp Feature: domain Description: GIIM Note: maturase Location: 2398961-2399180 bp Feature: domain Description: GIIM Note: maturase Location: 2398961 -23991 80 bp Feature: gene Location: 2399452-2401173 bp Feature: gene Location: 2401186-2401755 bp Feature: domain Description: PilW Location: 2401192-2401333 bp Feature: domain Description: PilW Location: 2401 1 92-2401 333 bp Feature: gene Location: 2741566-2741703 bp Feature: gene Location: 2741768-2741905 bp Feature: gene Location: 2741902-2743155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2742094-2742712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2742094-274271 2 bp Feature: domain Description: GIIM Note: maturase Location: 2742760-2742973 bp Feature: domain Description: GIIM Note: maturase Location: 2742760-2742973 bp Feature: gene Location: 2743346-2744077 bp Feature: domain Description: RsuA Location: 2743352-2744054 bp Feature: domain Description: RsuA Location: 2743352-2744054 bp Feature: gene Location: 2744220-2744744 bp Feature: domain Description: PRK03147 Location: 2744226-2744742 bp Feature: domain Description: PRK031 47 Location: 2744226-2744742 bp Feature: gene Location: 3131021-3131158 bp Feature: gene Location: 3131223-3131360 bp Feature: gene Location: 3131357-3132610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3131549-3132167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 31 549-31 321 67 bp Feature: domain Description: GIIM Note: maturase Location: 3132215-3132428 bp Feature: domain Description: GIIM Note: maturase Location: 31 3221 5-31 32428 bp Feature: gene Location: 3132821-3133132 bp Feature: domain Description: CelA Location: 3132824-3133124 bp Feature: domain Description: CelA Location: 31 32824-31 331 24 bp Feature: gene Location: 3133134-3133466 bp Feature: domain Description: CelC Location: 3133161-3133458 bp Feature: domain Description: CelC Location: 31 331 61 -31 33458 bp Feature: gene Location: 3606537-3607175 bp Feature: domain Description: N6_N4_Mtase Location: 3606543-3606708 bp Feature: domain Description: N6_N4_Mtase Location: 3606543-3606708 bp Feature: gene Location: 3608044-3608346 bp Feature: gene Location: 3608854-3609597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3608860-3609316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3608860-360931 6 bp Feature: domain Description: GIIM Note: maturase Location: 3609364-3609541 bp Feature: domain Description: GIIM Note: maturase Location: 3609364-3609541 bp Feature: gene Location: 3609511-3609786 bp Feature: gene Location: 3609883-3610077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3587 (Restriction endonuclease ), Mod (COG2189), RVT-GII, GIIM (pfam08388), DUF4391 (pfam14335), CspC (COG1278), DUF2564 (pfam10819), recA (PRK09519), HNHc (smart00507), ileS (TIGR00392)
DivIVA (pfam05103), PRK04375 (protoheme IX farnesyltransferase; Provisional), CtaA (COG1612), PycA (COG1038), vWFA (cl00057), BID_2 (smart00635), PilW (pfam16074), RsuA (COG1187), PRK03147 (thiol-disulfide oxidoreductase ResA), CelA (TIGR03030)
CelC (COG1447), N6_N4_Mtase (pfam01555)