myRT

myRT report for GCA_003183875.1_ASM318387v1

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Seq: QHCW01000134.1 Escherichia coli strain 200H contig_201_34_75, whole genome shotgun sequence (2544 bp)
Overview 1 RT 1: 643-2432 bp Neighborhood of RT #1 [643, 2479] PRK09692 RVT-UG7 Feature: gene Location: 643-1827 bp Feature: domain Description: PRK09692 Location: 649-1804 bp Feature: domain Description: PRK09692 Location: 649-1 804 bp Feature: gene Location: 1820-2479 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2228-2432 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2228-2432 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG7

Seq: QHCW01000089.1 Escherichia coli strain 200H contig_23_51_33, whole genome shotgun sequence (13881 bp)
Overview 1 RT 1: 5511-9311 bp Neighborhood of RT #1 [5511, 9313] PHA02517 RVT-GII GIIM PHA02517 PRK09413 Feature: gene Location: 5511-5639 bp Feature: gene Location: 5489-5968 bp Feature: domain Description: PHA02517 Location: 5549-5903 bp Feature: domain Description: PHA02 517 Location: 5549-5903 bp Feature: gene Location: 6560-8083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6833-7565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6833-7565 bp Feature: domain Description: GIIM Note: maturase Location: 7640-7838 bp Feature: domain Description: GIIM Note: maturase Location: 7640-7838 bp Feature: gene Location: 8260-8646 bp Feature: domain Description: PHA02517 Location: 8263-8644 bp Feature: domain Description: PHA02 517 Location: 82 63-8644 bp Feature: gene Location: 8948-9313 bp Feature: domain Description: PRK09413 Location: 8951-9311 bp Feature: domain Description: PRK09413 Location: 8951-9311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK09413 (IS2 repressor TnpA; Reviewed)

Seq: QHCW01000097.1 Escherichia coli strain 200H contig_98_27_10, whole genome shotgun sequence (9224 bp)
Overview 1 RT 1: 7196-8432 bp Neighborhood of RT #1 [7196, 9223] RVT-UG7 Feature: gene Location: 7196-7336 bp Feature: gene Location: 7446-8186 bp Feature: gene Location: 8183-9223 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 8198-8432 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 8198-843 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7