myRT

myRT report for GCA_003183935.1_ASM318393v1

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Seq: QHHC01000023.1 Klebsiella pneumoniae strain GML-KP50-Col_R-TR NODE_23_length_76772_cov_16.962907, whole genome shotgun sequence (76772 bp)
Overview 1 RT 1: 880-10581 bp Neighborhood of RT #1 [880, 10790] tape_meas_TP901 COG5283 COG3499 RVT-UG15 COG5301 Tail_P2_I YjdB LRR_3 LRR_3 LRR_3 Feature: gene Location: 880-3855 bp Feature: domain Description: tape_meas_TP901 Location: 1444-2494 bp Feature: domain Description: tape_meas_TP901 Location: 1 444-2494 bp Feature: domain Description: COG5283 Location: 2854-3259 bp Feature: domain Description: COG5283 Location: 2854-3259 bp Feature: gene Location: 3871-4362 bp Feature: domain Description: COG3499 Location: 3874-4306 bp Feature: domain Description: COG3499 Location: 3874-4306 bp Feature: gene Location: 4976-6265 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 5063-5486 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 5063-5486 bp Feature: gene Location: 6458-7555 bp Feature: domain Description: COG5301 Location: 6479-6944 bp Feature: domain Description: COG5301 Location: 6479-6944 bp Feature: gene Location: 7764-10790 bp Feature: domain Description: Tail_P2_I Location: 7794-8214 bp Feature: domain Description: Tail_P2_I Location: 7794-821 4 bp Feature: domain Description: YjdB Location: 8343-8580 bp Feature: domain Description: YjdB Location: 8343-8580 bp Feature: domain Description: LRR_3 Location: 8946-9258 bp Feature: domain Description: LRR_3 Location: 8946-9258 bp Feature: domain Description: LRR_3 Location: 9591-9975 bp Feature: domain Description: LRR_3 Location: 9591 -9975 bp Feature: domain Description: LRR_3 Location: 10233-10581 bp Feature: domain Description: LRR_3 Location: 1 0233-1 0581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT tape_meas_TP901 (TIGR01760), COG5283 (Phage-related tail protein ), COG3499 (Phage protein U ), RVT-UG15, COG5301 (Phage-related tail fibre protein ), Tail_P2_I (pfam09684), YjdB (COG5492), LRR_3 (sd00036)

Seq: QHHC01000036.1 Klebsiella pneumoniae strain GML-KP50-Col_R-TR NODE_36_length_36991_cov_26.705275, whole genome shotgun sequence (36991 bp)
Overview 1 RT 1: 12385-15501 bp Neighborhood of RT #1 [12385, 15501] PRK10276 RVT-GII Feature: gene Location: 12385-12810 bp Feature: domain Description: PRK10276 Location: 12388-12796 bp Feature: domain Description: PRK102 76 Location: 12 388-12 796 bp Feature: gene Location: 13004-13216 bp Feature: gene Location: 13291-14700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13618-14308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13618-14308 bp Feature: gene Location: 14934-15164 bp Feature: gene Location: 15223-15501 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII