myRT

myRT report for GCA_003183975.1_ASM318397v1

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Seq: QHHA01000024.1 Klebsiella pneumoniae strain GML-KP10-Col_R-TR NODE_24_length_79687_cov_32.299115, whole genome shotgun sequence (79687 bp)
Overview 1 RT 1: 40822-47690 bp Neighborhood of RT #1 [40822, 47692] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 40822-41550 bp Feature: domain Description: FimC Location: 40870-41533 bp Feature: domain Description: FimC Location: 40870-41 533 bp Feature: gene Location: 41582-44191 bp Feature: domain Description: FimD Location: 41639-44180 bp Feature: domain Description: FimD Location: 41 639-441 80 bp Feature: gene Location: 44191-46269 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 44599-45043 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 44599-45043 bp Feature: gene Location: 46326-46766 bp Feature: domain Description: Integrase_1 Location: 46332-46548 bp Feature: domain Description: Integrase_1 Location: 46332-46548 bp Feature: gene Location: 47027-47692 bp Feature: domain Description: INT_P4_C Location: 47132-47690 bp Feature: domain Description: INT_P4_C Location: 471 32-47690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: QHHA01000062.1 Klebsiella pneumoniae strain GML-KP10-Col_R-TR NODE_62_length_2272_cov_88.410953, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QHHA01000066.1 Klebsiella pneumoniae strain GML-KP10-Col_R-TR NODE_66_length_1914_cov_297.626997, whole genome shotgun sequence (1914 bp)
Overview 1 RT 1: 60-1913 bp Neighborhood of RT #1 [60, 1913] RVT-GII Feature: gene Location: 60-1547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: gene Location: 1701-1913 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII