myRT

myRT report for GCA_003184085.1_ASM318408v1

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Seq: QHHR01000002.1 Vibrio vulnificus strain 86573B contig02, whole genome shotgun sequence (306404 bp)
Overview 1 RT 1: 2073-5881 bp Neighborhood of RT #1 [2073, 5949] RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Cas2_I_II_III Feature: gene Location: 2073-2864 bp Feature: gene Location: 2919-3101 bp Feature: gene Location: 3306-5378 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3510-4113 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 351 0-41 1 3 bp Feature: domain Description: Cas1_I-II-III Location: 4401-5337 bp Feature: domain Description: Cas1 _I-II-III Location: 4401 -5337 bp Feature: gene Location: 5378-5662 bp Feature: domain Description: Cas2_I_II_III Location: 5396-5609 bp Feature: domain Description: Cas2_I_II_III Location: 5396-5609 bp Feature: gene Location: 5671-5949 bp Feature: domain Description: Cas2_I_II_III Location: 5680-5881 bp Feature: domain Description: Cas2_I_II_III Location: 5680-5881 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: QHHR01000051.1 Vibrio vulnificus strain 86573B contig51, whole genome shotgun sequence (11753 bp)
Overview 1 RT 1: 2446-8801 bp Neighborhood of RT #1 [2446, 9238] AAA_15 RVT-Retrons Mrr_cat zf-C4_Topoisom Phage_GPA Feature: gene Location: 2446-2634 bp Feature: gene Location: 3096-5351 bp Feature: domain Description: AAA_15 Location: 3099-4095 bp Feature: domain Description: AAA_15 Location: 3099-4095 bp Feature: gene Location: 5490-6608 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5670-6216 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5670-62 16 bp Feature: gene Location: 6748-7605 bp Feature: domain Description: Mrr_cat Location: 7081-7411 bp Feature: domain Description: Mrr_cat Location: 7081-7411 bp Feature: domain Description: zf-C4_Topoisom Location: 7483-7594 bp Feature: domain Description: zf-C4_Topoisom Location: 7483-7594 bp Feature: gene Location: 7694-9238 bp Feature: domain Description: Phage_GPA Location: 8057-8801 bp Feature: domain Description: Phage_GPA Location: 8057-8801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Mrr_cat (pfam04471), zf-C4_Topoisom (pfam01396), Phage_GPA (pfam05840)