myRT

myRT report for GCA_003187265.1_ASM318726v1

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Seq: QADZ01000001.1 Listeria monocytogenes strain LM-F-141 LM-F-141_scaffolds_1, whole genome shotgun sequence (1213893 bp)
Overview 1 RT 1: 7807-11883 bp Neighborhood of RT #1 [7807, 11885] YdeE PRK13316 RVT-AbiP2 Arsenite_oxidase RpmF Feature: gene Location: 7807-8286 bp Feature: domain Description: YdeE Location: 7810-8281 bp Feature: domain Description: YdeE Location: 781 0-8281 bp Feature: gene Location: 8321-8809 bp Feature: domain Description: PRK13316 Location: 8447-8807 bp Feature: domain Description: PRK1 331 6 Location: 8447-8807 bp Feature: gene Location: 9139-10845 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 9529-9988 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 9529-9988 bp Feature: gene Location: 11075-11650 bp Feature: domain Description: Arsenite_oxidase Location: 11087-11576 bp Feature: domain Description: Arsenite_oxidase Location: 1 1 087-1 1 576 bp Feature: gene Location: 11715-11885 bp Feature: domain Description: RpmF Location: 11718-11883 bp Feature: domain Description: RpmF Location: 1 1 71 8-1 1 883 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdeE (COG3708), PRK13316 (heme oxygenase IsdG), RVT-AbiP2, Arsenite_oxidase, RpmF (COG0333)

Seq: QADZ01000004.1 Listeria monocytogenes strain LM-F-141 LM-F-141_scaffolds_4, whole genome shotgun sequence (240452 bp)
Overview 1 RT 1: 224583-229924 bp Neighborhood of RT #1 [224583, 229924] SUF_scaf_2 sufB RVT-Retrons Trypsin Feature: gene Location: 224583-224984 bp Feature: domain Description: SUF_scaf_2 Location: 224586-224961 bp Feature: domain Description: SUF_scaf_2 Location: 2 2 4586-2 2 4961 bp Feature: gene Location: 225007-226401 bp Feature: domain Description: sufB Location: 225034-226372 bp Feature: domain Description: sufB Location: 2 2 5034-2 2 6372 bp Feature: gene Location: 226805-228502 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 226967-227561 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 6967-2 2 7561 bp Feature: domain Description: Trypsin Location: 227885-228476 bp Feature: domain Description: Trypsin Location: 2 2 7885-2 2 8476 bp Feature: gene Location: 228642-229598 bp Feature: gene Location: 229607-229924 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SUF_scaf_2 (TIGR01994), sufB (TIGR01980), RVT-Retrons, Trypsin (pfam00089)