myRT

myRT report for GCA_003194495.1_ASM319449v1

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Seq: PQXE01000148.1 Deltaproteobacteria bacterium isolate E20SeepSRB2 NODE_261_length_1479_cov_25.2988, whole genome shotgun sequence (1479 bp)
Overview 1 RT 1: 467-1477 bp Neighborhood of RT #1 [467, 1476] RVT-GII Feature: gene Location: 467-736 bp Feature: gene Location: 859-1476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1213-1477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 3-1 477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PQXE01000026.1 Deltaproteobacteria bacterium isolate E20SeepSRB2 NODE_26_length_44811_cov_12.7589, whole genome shotgun sequence (44811 bp)
Overview 1 RT 1: 213-2831 bp Neighborhood of RT #1 [213, 2831] RVT-GII GIIM Feature: gene Location: 213-380 bp Feature: gene Location: 367-777 bp Feature: gene Location: 897-2261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1224-1836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 2 4-1836 bp Feature: domain Description: GIIM Note: maturase Location: 1890-2100 bp Feature: domain Description: GIIM Note: maturase Location: 1890-2 100 bp Feature: gene Location: 2277-2522 bp Feature: gene Location: 2601-2831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PQXE01000029.1 Deltaproteobacteria bacterium isolate E20SeepSRB2 NODE_29_length_41057_cov_19.5749, whole genome shotgun sequence (41057 bp)
Overview 1 RT 1: 237-1244 bp Neighborhood of RT #1 [237, 1244] RVT-GII Feature: gene Location: 237-632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 498-630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 498-63 0 bp Feature: gene Location: 739-870 bp Feature: gene Location: 969-1244 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PQXE01000005.1 Deltaproteobacteria bacterium isolate E20SeepSRB2 NODE_5_length_109476_cov_16.0782, whole genome shotgun sequence (109476 bp)
Overview 1 RT 1: 88676-92340 bp Neighborhood of RT #1 [88676, 92360] RVT-GII Laminin_G_3 Tas Lysophospholipase_L1_like Feature: gene Location: 88676-88804 bp Feature: gene Location: 89239-89397 bp Feature: gene Location: 89618-90616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89780-90011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89780-90011 bp Feature: domain Description: Laminin_G_3 Location: 90131-90602 bp Feature: domain Description: Laminin_G_3 Location: 90131-90602 bp Feature: gene Location: 90671-91660 bp Feature: domain Description: Tas Location: 90674-91610 bp Feature: domain Description: Tas Location: 90674 -91610 bp Feature: gene Location: 91728-92360 bp Feature: domain Description: Lysophospholipase_L1_like Location: 91851-92340 bp Feature: domain Description: Lysophospholipase_L1_like Location: 91851-9234 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Laminin_G_3 (pfam13385), Tas (COG0667), Lysophospholipase_L1_like (cd01822)

Seq: PQXE01000008.1 Deltaproteobacteria bacterium isolate E20SeepSRB2 NODE_8_length_91043_cov_12.013, whole genome shotgun sequence (91043 bp)
Overview 1 RT 1: 71422-78311 bp Neighborhood of RT #1 [71422, 78325] COG2865 TPR TPR RRM CRISPR_Cas6 RVT-CRISPR Cas1_I-II-III Cas6_III PRK05764 Feature: gene Location: 71422-71592 bp Feature: gene Location: 71631-73472 bp Feature: domain Description: COG2865 Location: 71676-72480 bp Feature: domain Description: COG2865 Location: 71676-72480 bp Feature: domain Description: TPR Location: 72513-72786 bp Feature: domain Description: TPR Location: 725 13-72786 bp Feature: domain Description: TPR Location: 72816-73206 bp Feature: domain Description: TPR Location: 72816-73206 bp Feature: domain Description: RRM Location: 73248-73458 bp Feature: domain Description: RRM Location: 73248-7345 8 bp Feature: gene Location: 73832-76696 bp Feature: domain Description: CRISPR_Cas6 Location: 74015-74366 bp Feature: domain Description: CRISPR_Cas6 Location: 74015 -74366 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 74657-75269 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 7465 7-75 269 bp Feature: domain Description: Cas1_I-II-III Location: 75704-76655 bp Feature: domain Description: Cas1_I-II-III Location: 75 704-7665 5 bp Feature: gene Location: 76758-77084 bp Feature: domain Description: Cas6_III Location: 76857-76998 bp Feature: domain Description: Cas6_III Location: 7685 7-76998 bp Feature: gene Location: 77117-78325 bp Feature: domain Description: PRK05764 Location: 77138-78311 bp Feature: domain Description: PRK05 764 Location: 77138-78311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2865 (Predicted transcriptional regulator, contains HTH domain ), TPR (smart00028), RRM (smart00360), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas6_III (cd09760), PRK05764 (aspartate aminotransferase; Provisional)