myRT

myRT report for GCA_003195295.1_ASM319529v1

Download annotations/find similar RTs

Seq: QIVB01000014.1 Klebsiella pneumoniae strain WUSM_KP_99 NODE_14_length_136679_cov_9.37695, whole genome shotgun sequence (136679 bp)
Overview 1 RT 1: 48687-55856 bp Neighborhood of RT #1 [48687, 55873] EAL RVT-UG4 FimD FimC Feature: gene Location: 48687-48893 bp Feature: gene Location: 49016-49837 bp Feature: domain Description: EAL Location: 49700-49814 bp Feature: domain Description: EAL Location: 49700-4981 4 bp Feature: gene Location: 50474-52504 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 50882-51326 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 50882-51 326 bp Feature: gene Location: 52504-55113 bp Feature: domain Description: FimD Location: 52561-55102 bp Feature: domain Description: FimD Location: 52561 -551 02 bp Feature: gene Location: 55145-55873 bp Feature: domain Description: FimC Location: 55193-55856 bp Feature: domain Description: FimC Location: 551 93-55856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EAL (smart00052), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: QIVB01000069.1 Klebsiella pneumoniae strain WUSM_KP_99 NODE_69_length_3825_cov_104.067, whole genome shotgun sequence (3825 bp)
Overview 1 RT 1: 3-3374 bp Neighborhood of RT #1 [3, 3766] RVT-GII RVT-GII Feature: gene Location: 3-215 bp Feature: gene Location: 369-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: gene Location: 2279-3766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2684-3374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 684-3374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII