myRT

myRT report for GCA_003195755.1_ASM319575v1

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Seq: QIWG01000022.1 Klebsiella pneumoniae strain WUSM_KP_68 NODE_22_length_93157_cov_11.4986, whole genome shotgun sequence (93157 bp)
Overview 1 RT 1: 40824-48100 bp Neighborhood of RT #1 [40824, 48102] FimC FimD RVT-UG4 Integrase_1 PRK09692 Feature: gene Location: 40824-41552 bp Feature: domain Description: FimC Location: 40857-41535 bp Feature: domain Description: FimC Location: 40857-41 535 bp Feature: gene Location: 41584-44193 bp Feature: domain Description: FimD Location: 41641-44182 bp Feature: domain Description: FimD Location: 41 641 -441 82 bp Feature: gene Location: 44193-46271 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 44601-45045 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 44601 -45045 bp Feature: gene Location: 46328-46768 bp Feature: domain Description: Integrase_1 Location: 46334-46550 bp Feature: domain Description: Integrase_1 Location: 46334-46550 bp Feature: gene Location: 47029-48102 bp Feature: domain Description: PRK09692 Location: 47035-48100 bp Feature: domain Description: PRK09692 Location: 47035-481 00 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional)

Seq: QIWG01000028.1 Klebsiella pneumoniae strain WUSM_KP_68 NODE_28_length_59840_cov_19.1985, whole genome shotgun sequence (59840 bp)
Overview 1 RT 1: 7557-10741 bp Neighborhood of RT #1 [7557, 10741] PRK10276 RVT-GII Feature: gene Location: 7557-7982 bp Feature: domain Description: PRK10276 Location: 7560-7968 bp Feature: domain Description: PRK102 76 Location: 7560-7968 bp Feature: gene Location: 8100-8333 bp Feature: gene Location: 8384-9895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8789-9503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8789-9503 bp Feature: gene Location: 10129-10359 bp Feature: gene Location: 10418-10741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII