myRT

myRT report for GCA_003196015.1_ASM319601v1

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Seq: QIXB01000013.1 Klebsiella variicola strain WUSM_KV_47 NODE_13_length_181907_cov_27.5769, whole genome shotgun sequence (181907 bp)
Overview 1 RT 1: 14305-18012 bp Neighborhood of RT #1 [14305, 18017] Tra5 PHA02517 RVT-GII GIIM PRK09413 Feature: gene Location: 14305-14763 bp Feature: domain Description: Tra5 Location: 14317-14740 bp Feature: domain Description: Tra5 Location: 1 431 7-1 4740 bp Feature: gene Location: 14777-15196 bp Feature: domain Description: PHA02517 Location: 14780-15188 bp Feature: domain Description: PHA0251 7 Location: 1 4780-1 51 88 bp Feature: gene Location: 15319-16842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15592-16324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5592-1 6324 bp Feature: domain Description: GIIM Note: maturase Location: 16438-16597 bp Feature: domain Description: GIIM Note: maturase Location: 1 6438-1 6597 bp Feature: gene Location: 17256-17507 bp Feature: gene Location: 17727-18017 bp Feature: domain Description: PRK09413 Location: 17730-18012 bp Feature: domain Description: PRK0941 3 Location: 1 7730-1 801 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK09413 (IS2 repressor TnpA; Reviewed)

Seq: QIXB01000051.1 Klebsiella variicola strain WUSM_KV_47 NODE_51_length_12936_cov_44.4665, whole genome shotgun sequence (12936 bp)
Overview 1 RT 1: 2331-6642 bp Neighborhood of RT #1 [2331, 6642] PFDH_like PHA02517 RVT-GII GIIM Feature: gene Location: 2331-3464 bp Feature: domain Description: PFDH_like Location: 2334-3462 bp Feature: domain Description: PFDH_like Location: 2 334-3462 bp Feature: gene Location: 3867-4064 bp Feature: domain Description: PHA02517 Location: 3870-4020 bp Feature: domain Description: PHA02 517 Location: 3870-402 0 bp Feature: gene Location: 4241-5764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4514-5246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4514-52 46 bp Feature: domain Description: GIIM Note: maturase Location: 5324-5519 bp Feature: domain Description: GIIM Note: maturase Location: 532 4-5519 bp Feature: gene Location: 5835-6449 bp Feature: gene Location: 6391-6642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PFDH_like (cd08282), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: QIXB01000062.1 Klebsiella variicola strain WUSM_KV_47 NODE_62_length_7737_cov_42.9722, whole genome shotgun sequence (7737 bp)
Overview 1 RT 1: 511-4338 bp Neighborhood of RT #1 [511, 4338] HHA RVT-GII INT_Cre_C Feature: gene Location: 511-762 bp Feature: domain Description: HHA Location: 559-742 bp Feature: domain Description: HHA Location: 559-742 bp Feature: gene Location: 1057-1269 bp Feature: gene Location: 1344-2612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1650-2184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1650-2184 bp Feature: gene Location: 2819-3955 bp Feature: domain Description: INT_Cre_C Location: 3242-3896 bp Feature: domain Description: INT_Cre_C Location: 3 242-3 896 bp Feature: gene Location: 4021-4338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, INT_Cre_C (cd00799), HHA (pfam05321)