myRT

myRT report for GCA_003196295.1_ASM319629v1

Download annotations/find similar RTs

Seq: QIYC01000102.1 Klebsiella pneumoniae strain WUSM_KP_20 NODE_102_length_4882_cov_49.7786, whole genome shotgun sequence (4882 bp)
Overview 1 RT 1: 1059-4837 bp Neighborhood of RT #1 [1059, 4837] Phage_lambda_P SLATT_5 RVT-UG17 Feature: gene Location: 1059-1730 bp Feature: domain Description: Phage_lambda_P Location: 1329-1626 bp Feature: domain Description: Phage_lambda_P Location: 1 329-1 626 bp Feature: gene Location: 2017-2556 bp Feature: domain Description: SLATT_5 Location: 2023-2533 bp Feature: domain Description: SLATT_5 Location: 2023-2533 bp Feature: gene Location: 2546-3916 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2774-3380 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 2774-3380 bp Feature: gene Location: 3996-4217 bp Feature: gene Location: 4316-4837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_lambda_P (pfam06992), SLATT_5 (pfam18160), RVT-UG17

Seq: QIYC01000130.1 Klebsiella pneumoniae strain WUSM_KP_20 NODE_130_length_2715_cov_78.9268, whole genome shotgun sequence (2715 bp)
Overview 1 RT 1: 160-2410 bp Neighborhood of RT #1 [160, 2410] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 160-1875 bp Feature: domain Description: RVT_N Location: 214-457 bp Feature: domain Description: RVT_N Location: 2 14-457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502-1153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502 -1153 bp Feature: domain Description: GIIM Note: maturase Location: 1207-1438 bp Feature: domain Description: GIIM Note: maturase Location: 12 07-1438 bp Feature: domain Description: HNHc Note: nucleases Location: 1672-1828 bp Feature: domain Description: HNHc Note: nucleases Location: 1672 -182 8 bp Feature: gene Location: 1928-2104 bp Feature: gene Location: 2240-2410 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: QIYC01000135.1 Klebsiella pneumoniae strain WUSM_KP_20 NODE_135_length_2273_cov_298.531, whole genome shotgun sequence (2273 bp)
Overview 1 RT 1: 93-2272 bp Neighborhood of RT #1 [93, 2272] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 66-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173 -13 71 bp Feature: gene Location: 1910-2272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QIYC01000143.1 Klebsiella pneumoniae strain WUSM_KP_20 NODE_143_length_1870_cov_422.187, whole genome shotgun sequence (1870 bp)
Overview 1 RT 1: 16-1869 bp Neighborhood of RT #1 [16, 1869] RVT-GII Feature: gene Location: 16-1503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 421-1111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 21-1111 bp Feature: gene Location: 1657-1869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII