myRT

myRT report for GCA_003201335.1_ASM320133v1

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Seq: QICW01000001.1 Paenibacillus taichungensis strain DB-4 Ga0222418_101, whole genome shotgun sequence (1261824 bp)
Overview 1 RT 1: 800364-805832 bp Neighborhood of RT #1 [800364, 805832] YjbM RVT-UG7 HEPN_Cthe2314 Feature: gene Location: 800364-801476 bp Feature: domain Description: YjbM Location: 800412-801009 bp Feature: domain Description: YjbM Location: 80041 2-801 009 bp Feature: gene Location: 801535-802254 bp Feature: gene Location: 802422-804008 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 802827-803244 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 802827-803244 bp Feature: gene Location: 804369-805133 bp Feature: domain Description: HEPN_Cthe2314 Location: 804537-805098 bp Feature: domain Description: HEPN_Cthe231 4 Location: 804537-805098 bp Feature: gene Location: 805347-805832 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YjbM (COG2357), RVT-UG7, HEPN_Cthe2314 (pfam18730)

Seq: QICW01000020.1 Paenibacillus taichungensis strain DB-4 Ga0222418_120, whole genome shotgun sequence (67106 bp)
Overview 1 RT 1: 60452-66664 bp Neighborhood of RT #1 [60452, 66664] Mrr_cat recD RVT-Retrons HTH_XRE Feature: gene Location: 60452-61288 bp Feature: gene Location: 62535-64829 bp Feature: domain Description: Mrr_cat Location: 62553-62847 bp Feature: domain Description: Mrr_cat Location: 62 553-62 847 bp Feature: domain Description: recD Location: 62949-63168 bp Feature: domain Description: recD Location: 62 949-63168 bp Feature: gene Location: 65007-65933 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 65169-65709 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 65169-65709 bp Feature: gene Location: 65908-66246 bp Feature: domain Description: HTH_XRE Location: 65935-66100 bp Feature: domain Description: HTH_XRE Location: 65935-66100 bp Feature: gene Location: 66527-66664 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mrr_cat (pfam04471), recD (TIGR01447), RVT-Retrons, HTH_XRE (smart00530)

Seq: QICW01000027.1 Paenibacillus taichungensis strain DB-4 Ga0222418_127, whole genome shotgun sequence (1937 bp)
Overview 1 RT 1: 105-1934 bp Neighborhood of RT #1 [105, 1934] RVT-GII GIIM Feature: gene Location: 105-1397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-1038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-103 8 bp Feature: domain Description: GIIM Note: maturase Location: 1161-1335 bp Feature: domain Description: GIIM Note: maturase Location: 1161-13 3 5 bp Feature: gene Location: 1767-1934 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)