myRT

myRT report for GCA_003202275.1_ASM320227v1

Download annotations/find similar RTs

Seq: MASV01000014.1 Prauserella coralliicola strain DSM 45821 BAY59_c14, whole genome shotgun sequence (82948 bp)
Overview 1 RT 1: 37878-40882 bp 2 RT 2: 78123-82783 bp Neighborhood of RT #1 [37878, 41040] RVT-GII GIIM DDE_Tnp_1_2 DUF4096 Neighborhood of RT #2 [78123, 82812] RVT-GII GIIM IS285 IS285 Feature: gene Location: 37878-38144 bp Feature: gene Location: 38395-38565 bp Feature: gene Location: 38851-40107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39067-39727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39067-39727 bp Feature: domain Description: GIIM Note: maturase Location: 39808-40030 bp Feature: domain Description: GIIM Note: maturase Location: 39808-40030 bp Feature: gene Location: 40185-40568 bp Feature: domain Description: DDE_Tnp_1_2 Location: 40263-40551 bp Feature: domain Description: DDE_Tnp_1 _2 Location: 40263-40551 bp Feature: gene Location: 40684-41040 bp Feature: domain Description: DUF4096 Location: 40690-40882 bp Feature: domain Description: DUF4096 Location: 40690-40882 bp Feature: gene Location: 78123-78401 bp Feature: gene Location: 78437-79333 bp Feature: gene Location: 79931-81400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80270-80966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80270-80966 bp Feature: domain Description: GIIM Note: maturase Location: 81038-81260 bp Feature: domain Description: GIIM Note: maturase Location: 81 038-81 260 bp Feature: gene Location: 81533-82123 bp Feature: domain Description: IS285 Location: 81536-82103 bp Feature: domain Description: IS285 Location: 81 536-821 03 bp Feature: gene Location: 82120-82812 bp Feature: domain Description: IS285 Location: 82204-82783 bp Feature: domain Description: IS285 Location: 82204-82783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1_2 (pfam13586), DUF4096 (pfam13340), IS285 (COG3328)

Seq: MASV01000015.1 Prauserella coralliicola strain DSM 45821 BAY59_c15, whole genome shotgun sequence (82296 bp)
Overview 1 RT 1: 32031-38350 bp Neighborhood of RT #1 [32031, 38358] COG5421 COG5421 IS285 RVT-GII GIIM Transposase_mut PRK07396 Feature: gene Location: 32031-33545 bp Feature: domain Description: COG5421 Location: 32574-32862 bp Feature: domain Description: COG542 1 Location: 32 574-32 862 bp Feature: domain Description: COG5421 Location: 33081-33390 bp Feature: domain Description: COG542 1 Location: 33081-33390 bp Feature: gene Location: 33804-34070 bp Feature: domain Description: IS285 Location: 33810-34050 bp Feature: domain Description: IS2 85 Location: 33810-34050 bp Feature: gene Location: 34218-35714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34602-35283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34602 -352 83 bp Feature: domain Description: GIIM Note: maturase Location: 35355-35589 bp Feature: domain Description: GIIM Note: maturase Location: 35355-35589 bp Feature: gene Location: 36168-37082 bp Feature: domain Description: Transposase_mut Location: 36228-37008 bp Feature: domain Description: Transposase_mut Location: 362 2 8-37008 bp Feature: gene Location: 37909-38358 bp Feature: domain Description: PRK07396 Location: 37918-38350 bp Feature: domain Description: PRK07396 Location: 37918-38350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5421 (Transposase ), IS285 (COG3328), RVT-GII, GIIM (pfam08388), Transposase_mut (pfam00872), PRK07396 (dihydroxynaphthoic acid synthetase; Validated)

Seq: MASV01000016.1 Prauserella coralliicola strain DSM 45821 BAY59_c16, whole genome shotgun sequence (113707 bp)
Overview 1 RT 1: 103312-106509 bp Neighborhood of RT #1 [103312, 106509] YfmG RVT-CRISPR-like QueC Feature: gene Location: 103312-103773 bp Feature: gene Location: 103770-104327 bp Feature: domain Description: YfmG Location: 103896-104322 bp Feature: domain Description: YfmG Location: 103 896-1043 22 bp Feature: gene Location: 104333-105112 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 104534-105071 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 10453 4-105071 bp Feature: gene Location: 105314-106018 bp Feature: domain Description: QueC Location: 105350-106010 bp Feature: domain Description: QueC Location: 1053 50-106010 bp Feature: gene Location: 106021-106509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-CRISPR, QueC (pfam06508)

Seq: MASV01000029.1 Prauserella coralliicola strain DSM 45821 BAY59_c31, whole genome shotgun sequence (4627 bp)
Overview 1 RT 1: 664-4003 bp Neighborhood of RT #1 [664, 4449] RVT-GII GIIM DDE_5 Feature: gene Location: 664-1350 bp Feature: gene Location: 1431-2915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1773-2463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1773-24 63 bp Feature: domain Description: GIIM Note: maturase Location: 2532-2742 bp Feature: domain Description: GIIM Note: maturase Location: 2532-274 2 bp Feature: gene Location: 3096-3311 bp Feature: gene Location: 3316-4449 bp Feature: domain Description: DDE_5 Location: 3376-4003 bp Feature: domain Description: DDE_5 Location: 3376-4 003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_5 (pfam13546)