myRT

myRT report for GCA_003203335.1_ASM320333v1

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Seq: BGND01000006.1 Escherichia coli MH16-510M DNA, contig_6, whole genome shotgun sequence (314733 bp)
Overview 1 RT 1: 173389-182962 bp Neighborhood of RT #1 [173389, 182976] Phage_GPA RVT-AbiP2 RVT-Retrons Q P Feature: gene Location: 173389-175665 bp Feature: domain Description: Phage_GPA Location: 173788-174775 bp Feature: domain Description: Phage_GPA Location: 1 73788-1 74775 bp Feature: gene Location: 175727-175987 bp Feature: gene Location: 176153-177697 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 176570-177023 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 76570-1 77023 bp Feature: gene Location: 178248-179438 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 178398-178980 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 78398-1 78980 bp Feature: gene Location: 180185-181204 bp Feature: domain Description: Q Location: 180188-181199 bp Feature: domain Description: Q Location: 1 801 88-1 81 1 99 bp Feature: gene Location: 181204-182976 bp Feature: domain Description: P Location: 181231-182962 bp Feature: domain Description: P Location: 1 81 231 -1 82962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-AbiP2, RVT-Retrons, Q (PHA02536), P (PHA02535)

Seq: BGND01000087.1 Escherichia coli MH16-510M DNA, contig_87, whole genome shotgun sequence (3237 bp)
Overview 1 RT 1: 85-2877 bp Neighborhood of RT #1 [85, 2930] RVT-GII GIIM PRK10002 Feature: gene Location: 85-1431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 181-913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 181-913 bp Feature: domain Description: GIIM Note: maturase Location: 988-1186 bp Feature: domain Description: GIIM Note: maturase Location: 988-1186 bp Feature: gene Location: 1518-1703 bp Feature: gene Location: 1950-2930 bp Feature: domain Description: PRK10002 Location: 1953-2877 bp Feature: domain Description: PRK10002 Location: 1953-2 877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK10002 (porin OmpF)