myRT

myRT report for GCA_003203985.1_ASM320398v1

Download annotations/find similar RTs

Seq: QJOJ01000008.1 Lactobacillus helveticus strain FAM1450 FAM1450_scf0008, whole genome shotgun sequence (36429 bp)
Overview 1 RT 1: 26010-31456 bp Neighborhood of RT #1 [26010, 31482] PRK09564 LysR RVT-GII GIIM P-type_ATPase_HM HMA Feature: gene Location: 26010-27374 bp Feature: domain Description: PRK09564 Location: 26025-27348 bp Feature: domain Description: PRK09564 Location: 26025-27348 bp Feature: gene Location: 27455-28201 bp Feature: domain Description: LysR Location: 27458-27842 bp Feature: domain Description: LysR Location: 27458-27842 bp Feature: gene Location: 28253-29023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28256-28544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28256-28544 bp Feature: domain Description: GIIM Note: maturase Location: 28601-28808 bp Feature: domain Description: GIIM Note: maturase Location: 28601 -28808 bp Feature: gene Location: 29329-31230 bp Feature: domain Description: P-type_ATPase_HM Location: 29392-31156 bp Feature: domain Description: P-type_ATPase_HM Location: 29392-31 1 56 bp Feature: gene Location: 31252-31482 bp Feature: domain Description: HMA Location: 31270-31456 bp Feature: domain Description: HMA Location: 31 270-31 456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09564 (coenzyme A disulfide reductase; Reviewed), LysR (COG0583), RVT-GII, GIIM (pfam08388), P-type_ATPase_HM (cd07553), HMA (pfam00403)

Seq: QJOJ01000021.1 Lactobacillus helveticus strain FAM1450 FAM1450_scf0021, whole genome shotgun sequence (28057 bp)
Overview 1 RT 1: 5224-14184 bp Neighborhood of RT #1 [5224, 14184] N6_Mtase N6_Mtase RVT-AbiK TIGR02687 Feature: gene Location: 5224-5547 bp Feature: gene Location: 5572-8793 bp Feature: domain Description: N6_Mtase Location: 6193-6445 bp Feature: domain Description: N6_Mtase Location: 6193-6445 bp Feature: domain Description: N6_Mtase Location: 6736-7189 bp Feature: domain Description: N6_Mtase Location: 6736-7189 bp Feature: gene Location: 8985-10856 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 9474-9861 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 9474-9861 bp Feature: gene Location: 11042-13528 bp Feature: domain Description: TIGR02687 Location: 11063-13475 bp Feature: domain Description: TIGR02 687 Location: 11063-13475 bp Feature: gene Location: 13588-14184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), RVT-AbiK, TIGR02687 (TIGR02687 family protein)

Seq: QJOJ01000057.1 Lactobacillus helveticus strain FAM1450 FAM1450_scf0057, whole genome shotgun sequence (12198 bp)
Overview 1 RT 1: 6040-10915 bp Neighborhood of RT #1 [6040, 10915] SunT GIIM RVT-GII Feature: gene Location: 6040-7626 bp Feature: domain Description: SunT Location: 6082-7621 bp Feature: domain Description: SunT Location: 6082-7621 bp Feature: gene Location: 7764-8102 bp Feature: domain Description: GIIM Note: maturase Location: 7770-7887 bp Feature: domain Description: GIIM Note: maturase Location: 7770-7887 bp Feature: gene Location: 8217-9062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8418-9036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8418-903 6 bp Feature: gene Location: 10348-10590 bp Feature: gene Location: 10646-10915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SunT (COG2274), GIIM (pfam08388), RVT-GII

Seq: QJOJ01000063.1 Lactobacillus helveticus strain FAM1450 FAM1450_scf0063, whole genome shotgun sequence (11308 bp)
Overview 1 RT 1: 1350-5275 bp Neighborhood of RT #1 [1350, 5275] RmlD_sub_bind RVT-AbiA abortive_AbiA Feature: gene Location: 1350-1955 bp Feature: gene Location: 1998-2324 bp Feature: domain Description: RmlD_sub_bind Location: 2004-2313 bp Feature: domain Description: RmlD_sub_bind Location: 2004 -2313 bp Feature: gene Location: 2567-4411 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 2936-3434 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 2936-34 34 bp Feature: domain Description: abortive_AbiA Location: 3635-4370 bp Feature: domain Description: abortive_AbiA Location: 3635-4 370 bp Feature: gene Location: 4445-4864 bp Feature: gene Location: 4871-5275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RmlD_sub_bind (pfam04321), RVT-AbiA, abortive_AbiA (TIGR04499)