myRT

myRT report for GCA_003204935.1_ASM320493v1

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Seq: QJQJ01000028.1 Serratia marcescens strain 2032 NODE_28_length_35035_cov_60.6676, whole genome shotgun sequence (35035 bp)
Overview 1 RT 1: 12931-17233 bp Neighborhood of RT #1 [12931, 17370] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 12931-13161 bp Feature: domain Description: umuC Location: 12934-13159 bp Feature: domain Description: umuC Location: 1 2934-1 31 59 bp Feature: gene Location: 13161-13835 bp Feature: domain Description: PRK10276 Location: 13413-13821 bp Feature: domain Description: PRK1 0276 Location: 1 341 3-1 3821 bp Feature: gene Location: 13989-15476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14394-15084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4394-1 5084 bp Feature: gene Location: 15725-16696 bp Feature: domain Description: StbA Location: 15728-16673 bp Feature: domain Description: StbA Location: 1 5728-1 6673 bp Feature: gene Location: 16699-17370 bp Feature: domain Description: Plasmid_stab_B Location: 16714-16921 bp Feature: domain Description: Plasmid_stab_B Location: 1 671 4-1 6921 bp Feature: domain Description: Plasmid_stab_B Location: 17026-17233 bp Feature: domain Description: Plasmid_stab_B Location: 1 7026-1 7233 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: QJQJ01000064.1 Serratia marcescens strain 2032 NODE_64_length_4128_cov_71.0325, whole genome shotgun sequence (4128 bp)
Overview 1 RT 1: 1-4029 bp Neighborhood of RT #1 [1, 4064] DDE_Tnp_1_5 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 1-960 bp Feature: domain Description: DDE_Tnp_1_5 Location: 94-427 bp Feature: domain Description: DDE_Tnp_1_5 Location: 94-42 7 bp Feature: gene Location: 1201-1626 bp Feature: domain Description: PHA02517 Location: 1225-1561 bp Feature: domain Description: PHA02 517 Location: 12 2 5-1561 bp Feature: gene Location: 2218-3741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2491-3223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 491-32 2 3 bp Feature: domain Description: GIIM Note: maturase Location: 3298-3496 bp Feature: domain Description: GIIM Note: maturase Location: 32 98-3496 bp Feature: gene Location: 3906-4064 bp Feature: domain Description: PHA02517 Location: 3909-4029 bp Feature: domain Description: PHA02 517 Location: 3909-402 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), DDE_Tnp_1_5 (pfam13737), RVT-GII, GIIM (pfam08388)