myRT

myRT report for GCA_003205575.1_ASM320557v1

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Seq: PYBW01000123.1 Streptomyces tateyamensis strain ATCC 21389 Streptomyces_tateyamensis_21389_contig_123, whole genome shotgun sequence (1923 bp)
Overview 1 RT 1: 77-1855 bp Neighborhood of RT #1 [77, 1855] RVT-GII GIIM Feature: gene Location: 77-1339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 293-953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 293-953 bp Feature: domain Description: GIIM Note: maturase Location: 1034-1253 bp Feature: domain Description: GIIM Note: maturase Location: 1 034-1 253 bp Feature: gene Location: 1682-1855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PYBW01000024.1 Streptomyces tateyamensis strain ATCC 21389 Streptomyces_tateyamensis_21389_contig_24, whole genome shotgun sequence (95752 bp)
Overview 1 RT 1: 70301-78952 bp Neighborhood of RT #1 [70301, 79056] CitA FhlA SpoIIE HATPase_RsbW-like RVT-GII GIIM WD40 KOG0266 WD40 SmtA Feature: gene Location: 70301-70840 bp Feature: gene Location: 71019-73658 bp Feature: domain Description: CitA Location: 71043-72018 bp Feature: domain Description: CitA Location: 71043-72 018 bp Feature: domain Description: FhlA Location: 72312-72516 bp Feature: domain Description: FhlA Location: 72 312 -72 516 bp Feature: domain Description: SpoIIE Location: 72645-73209 bp Feature: domain Description: SpoIIE Location: 72 645-732 09 bp Feature: domain Description: HATPase_RsbW-like Location: 73341-73578 bp Feature: domain Description: HATPase_RsbW-like Location: 73341-73578 bp Feature: gene Location: 74238-75701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74577-75273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74577-752 73 bp Feature: domain Description: GIIM Note: maturase Location: 75342-75561 bp Feature: domain Description: GIIM Note: maturase Location: 75342 -75561 bp Feature: gene Location: 76109-78421 bp Feature: domain Description: WD40 Location: 76376-77174 bp Feature: domain Description: WD40 Location: 76376-77174 bp Feature: domain Description: KOG0266 Location: 77192-77654 bp Feature: domain Description: KOG02 66 Location: 77192 -77654 bp Feature: domain Description: WD40 Location: 77834-78329 bp Feature: domain Description: WD40 Location: 77834-7832 9 bp Feature: gene Location: 78439-79056 bp Feature: domain Description: SmtA Location: 78547-78952 bp Feature: domain Description: SmtA Location: 78547-78952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CitA (COG3290), FhlA (COG3604), SpoIIE (pfam07228), HATPase_RsbW-like (cd16936), RVT-GII, GIIM (pfam08388), WD40 (smart00320), KOG0266 (KOG0266, WD40 repeat-containing protein ), SmtA (COG0500)

Seq: PYBW01000356.1 Streptomyces tateyamensis strain ATCC 21389 Streptomyces_tateyamensis_21389_contig_387, whole genome shotgun sequence (313 bp)
Overview 1 RT 1: 3-177 bp Neighborhood of RT #1 [3, 311] RVT-GII Feature: gene Location: 3-311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-177 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PYBW01000057.1 Streptomyces tateyamensis strain ATCC 21389 Streptomyces_tateyamensis_21389_contig_57, whole genome shotgun sequence (40747 bp)
Overview 1 RT 1: 35870-40219 bp Neighborhood of RT #1 [35870, 40314] PAS_4 PAS_4 GAF SpoIIE HATPase_RsbW-like AcrR RVT-GII GIIM Feature: gene Location: 35870-38284 bp Feature: domain Description: PAS_4 Location: 35918-36146 bp Feature: domain Description: PAS_4 Location: 35918-3614 6 bp Feature: domain Description: PAS_4 Location: 36266-36599 bp Feature: domain Description: PAS_4 Location: 36266-36599 bp Feature: domain Description: GAF Location: 36914-37148 bp Feature: domain Description: GAF Location: 36914 -3714 8 bp Feature: domain Description: SpoIIE Location: 37322-37904 bp Feature: domain Description: SpoIIE Location: 37322-37904 bp Feature: domain Description: HATPase_RsbW-like Location: 38036-38273 bp Feature: domain Description: HATPase_RsbW-like Location: 38036-38273 bp Feature: gene Location: 38402-39061 bp Feature: domain Description: AcrR Location: 38435-39041 bp Feature: domain Description: AcrR Location: 384 35-3904 1 bp Feature: gene Location: 39169-40314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39292-39916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39292-39916 bp Feature: domain Description: GIIM Note: maturase Location: 40009-40219 bp Feature: domain Description: GIIM Note: maturase Location: 4 0009-4 0219 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAS_4 (pfam08448), GAF (smart00065), SpoIIE (pfam07228), HATPase_RsbW-like (cd16936), AcrR (COG1309), RVT-GII, GIIM (pfam08388)

Seq: PYBW01000079.1 Streptomyces tateyamensis strain ATCC 21389 Streptomyces_tateyamensis_21389_contig_79, whole genome shotgun sequence (8917 bp)
Overview 1 RT 1: 5220-8595 bp Neighborhood of RT #1 [5220, 8792] HTH_33 RVT-GII GIIM DDE_3 Feature: gene Location: 5220-5879 bp Feature: gene Location: 5701-5958 bp Feature: domain Description: HTH_33 Location: 5773-5944 bp Feature: domain Description: HTH_33 Location: 5 773-5 944 bp Feature: gene Location: 6592-8061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6934-7630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6934-7630 bp Feature: domain Description: GIIM Note: maturase Location: 7702-7924 bp Feature: domain Description: GIIM Note: maturase Location: 7702-7924 bp Feature: gene Location: 8085-8792 bp Feature: domain Description: DDE_3 Location: 8175-8595 bp Feature: domain Description: DDE_3 Location: 8175 -85 95 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_33 (pfam13592), RVT-GII, GIIM (pfam08388), DDE_3 (pfam13358)