myRT

myRT report for GCA_003217095.1_ASM321709v1

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Seq: QJSR01000006.1 Rhizobium sp. PP-CC-3A-592 Ga0191663_106, whole genome shotgun sequence (322243 bp)
Overview 1 RT 1: 17767-26814 bp Neighborhood of RT #1 [17767, 26825] CheB-CheR_fusion CheR PAS PAS PAS PRK13559 CheB RVT-GII Transposase_mut PRK08591 Feature: gene Location: 17767-21735 bp Feature: domain Description: CheB-CheR_fusion Location: 17848-18379 bp Feature: domain Description: CheB-CheR_fusion Location: 1 7848-1 8379 bp Feature: domain Description: CheR Location: 18457-19231 bp Feature: domain Description: CheR Location: 1 8457-1 9231 bp Feature: domain Description: PAS Location: 19462-20182 bp Feature: domain Description: PAS Location: 1 9462-201 82 bp Feature: domain Description: PAS Location: 20218-20641 bp Feature: domain Description: PAS Location: 2021 8-20641 bp Feature: domain Description: PAS Location: 20722-20908 bp Feature: domain Description: PAS Location: 20722-20908 bp Feature: domain Description: PRK13559 Location: 20974-21700 bp Feature: domain Description: PRK1 3559 Location: 20974-21 700 bp Feature: gene Location: 21798-22739 bp Feature: domain Description: CheB Location: 21825-22359 bp Feature: domain Description: CheB Location: 21 825-22359 bp Feature: gene Location: 22961-24370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23315-24002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2331 5-24002 bp Feature: gene Location: 24826-25080 bp Feature: domain Description: Transposase_mut Location: 24832-24994 bp Feature: domain Description: Transposase_mut Location: 24832-24994 bp Feature: gene Location: 25467-26825 bp Feature: domain Description: PRK08591 Location: 25482-26814 bp Feature: domain Description: PRK08591 Location: 25482-2681 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CheB-CheR_fusion (cd16434), CheR (pfam01739), PAS (smart00091), PRK13559 (hypothetical protein; Provisional), CheB (COG2201), RVT-GII, Transposase_mut (pfam00872), PRK08591 (acetyl-CoA carboxylase biotin carboxylase subunit; Validated)

Seq: QJSR01000024.1 Rhizobium sp. PP-CC-3A-592 Ga0191663_124, whole genome shotgun sequence (2931 bp)
Overview 1 RT 1: 90-2830 bp Neighborhood of RT #1 [90, 2916] COG3415 RVT-GII GIIM DDE_3 Feature: gene Location: 90-473 bp Feature: domain Description: COG3415 Location: 93-435 bp Feature: domain Description: COG3415 Location: 93-435 bp Feature: gene Location: 753-1091 bp Feature: gene Location: 1139-2347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1304-1958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1304-1958 bp Feature: domain Description: GIIM Note: maturase Location: 2039-2255 bp Feature: domain Description: GIIM Note: maturase Location: 2 039-2 2 55 bp Feature: gene Location: 2401-2916 bp Feature: domain Description: DDE_3 Location: 2437-2830 bp Feature: domain Description: DDE_3 Location: 2 437-2 830 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_3 (pfam13358), COG3415 (Transposase )