myRT

myRT report for GCA_003219815.1_ASM321981v1

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Seq: QJVD01000013.1 Arthrobacter livingstonensis strain LI2 NODE_13_length_135870_cov_237.111, whole genome shotgun sequence (135870 bp)
Overview 1 RT 1: 120-7103 bp Neighborhood of RT #1 [120, 7117] RVT-Retrons Phage_int_SAM_1 INT_RitA_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitC_C_like RVT-Retrons Lipase_GDSL_2 LpqC Feature: gene Location: 120-575 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 123-348 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 23-348 bp Feature: gene Location: 741-1973 bp Feature: domain Description: Phage_int_SAM_1 Location: 1089-1305 bp Feature: domain Description: Phage_int_SAM_1 Location: 1 089-1 305 bp Feature: domain Description: INT_RitA_C_like Location: 1401-1938 bp Feature: domain Description: INT_RitA_C_like Location: 1 401 -1 938 bp Feature: gene Location: 1970-2956 bp Feature: domain Description: INT_RitB_C_like Location: 2303-2894 bp Feature: domain Description: INT_RitB_C_like Location: 2303-2894 bp Feature: gene Location: 2946-3950 bp Feature: domain Description: Phage_int_SAM_1 Location: 2988-3231 bp Feature: domain Description: Phage_int_SAM_1 Location: 2988-3231 bp Feature: domain Description: INT_RitC_C_like Location: 3321-3870 bp Feature: domain Description: INT_RitC_C_like Location: 3321 -3870 bp Feature: gene Location: 3966-5015 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4524-4914 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4524-491 4 bp Feature: gene Location: 5438-6235 bp Feature: domain Description: Lipase_GDSL_2 Location: 5621-6128 bp Feature: domain Description: Lipase_GDSL_2 Location: 5621 -61 28 bp Feature: gene Location: 6242-7117 bp Feature: domain Description: LpqC Location: 6269-7103 bp Feature: domain Description: LpqC Location: 6269-71 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, INT_RitB_C_like (cd00797), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), INT_RitC_C_like (cd01182), Lipase_GDSL_2 (pfam13472), LpqC (COG3509)