myRT

myRT report for GCA_003222835.1_ASM322283v1

Download annotations/find similar RTs

Seq: QHXE01000317.1 Acidobacteria bacterium isolate gp4 AA28 14_0903_12_30cm_scaffold_10532_curated, whole genome shotgun sequence (7322 bp)
Overview 1 RT 1: 202-5161 bp Neighborhood of RT #1 [202, 5178] Resolvase Recombinase Zn_ribbon_recom PHA02938 RVT-GII GIIM HNH FolA Feature: gene Location: 202-1914 bp Feature: domain Description: Resolvase Location: 214-655 bp Feature: domain Description: Resolvase Location: 21 4-655 bp Feature: domain Description: Recombinase Location: 793-1030 bp Feature: domain Description: Recombinase Location: 793-1 030 bp Feature: domain Description: Zn_ribbon_recom Location: 1081-1267 bp Feature: domain Description: Zn_ribbon_recom Location: 1 081 -1 267 bp Feature: gene Location: 2058-2405 bp Feature: domain Description: PHA02938 Location: 2268-2385 bp Feature: domain Description: PHA02938 Location: 2268-2385 bp Feature: gene Location: 2285-3532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2513-2801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251 3-2801 bp Feature: domain Description: GIIM Note: maturase Location: 2855-3089 bp Feature: domain Description: GIIM Note: maturase Location: 2855-3089 bp Feature: domain Description: HNH Note: nucleases Location: 3341-3479 bp Feature: domain Description: HNH Note: nucleases Location: 3341 -3479 bp Feature: gene Location: 3586-4380 bp Feature: gene Location: 4624-5178 bp Feature: domain Description: FolA Location: 4636-5161 bp Feature: domain Description: FolA Location: 4636-51 61 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), PHA02938 (hypothetical protein; Provisional), RVT-GII, GIIM (pfam08388), HNH (pfam01844), FolA (COG0262)

Seq: QHXE01001099.1 Acidobacteria bacterium isolate gp4 AA28 14_0903_12_30cm_scaffold_113546_curated, whole genome shotgun sequence (2383 bp)
Overview 1 RT 1: 774-2347 bp Neighborhood of RT #1 [774, 2382] RVT-GII group_II_RT_mat PHO4 Feature: gene Location: 774-1010 bp Feature: gene Location: 1044-1517 bp Feature: gene Location: 786-1898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1020-1539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 0-1539 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1554-1803 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1554-1803 bp Feature: gene Location: 2143-2382 bp Feature: domain Description: PHO4 Location: 2146-2347 bp Feature: domain Description: PHO4 Location: 2 146-2 347 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), PHO4 (pfam01384)

Seq: QHXE01000426.1 Acidobacteria bacterium isolate gp4 AA28 14_0903_12_30cm_scaffold_18816_curated, whole genome shotgun sequence (4312 bp)
Overview 1 RT 1: 2-4300 bp Neighborhood of RT #1 [2, 4311] COG3547 RVT-GII GIIM PRK05749 Feature: gene Location: 2-130 bp Feature: gene Location: 703-1809 bp Feature: domain Description: COG3547 Location: 865-1714 bp Feature: domain Description: COG3 547 Location: 865-1714 bp Feature: gene Location: 2064-3383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2325-2982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 25-2982 bp Feature: domain Description: GIIM Note: maturase Location: 3063-3294 bp Feature: domain Description: GIIM Note: maturase Location: 3 063 -3 294 bp Feature: gene Location: 4012-4311 bp Feature: domain Description: PRK05749 Location: 4015-4300 bp Feature: domain Description: PRK05749 Location: 4015-43 00 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), PRK05749 (3-deoxy-D-manno-octulosonic-acid transferase; Reviewed)

Seq: QHXE01000208.1 Acidobacteria bacterium isolate gp4 AA28 14_0903_12_30cm_scaffold_20208_curated, whole genome shotgun sequence (6711 bp)
Overview 1 RT 1: 4793-6333 bp Neighborhood of RT #1 [4793, 6710] RVT-GII Feature: gene Location: 4793-4996 bp Feature: gene Location: 5079-5222 bp Feature: gene Location: 5274-6710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5646-6333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 564 6-6333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QHXE01000369.1 Acidobacteria bacterium isolate gp4 AA28 14_0903_12_30cm_scaffold_24843_curated, whole genome shotgun sequence (5057 bp)
Overview 1 RT 1: 220-5035 bp Neighborhood of RT #1 [220, 5055] HTH_32 rve RVT-GII GIIM PAS PAS Feature: gene Location: 220-1476 bp Feature: domain Description: HTH_32 Location: 355-550 bp Feature: domain Description: HTH_32 Location: 35 5 -5 5 0 bp Feature: domain Description: rve Location: 643-1000 bp Feature: domain Description: rve Location: 643-1000 bp Feature: gene Location: 2119-3429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2392-3058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2392-305 8 bp Feature: domain Description: GIIM Note: maturase Location: 3136-3352 bp Feature: domain Description: GIIM Note: maturase Location: 3136-335 2 bp Feature: gene Location: 3466-3663 bp Feature: gene Location: 3778-5055 bp Feature: domain Description: PAS Location: 4198-4735 bp Feature: domain Description: PAS Location: 4198-4735 bp Feature: domain Description: PAS Location: 4819-5035 bp Feature: domain Description: PAS Location: 4819-5 035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), rve (pfam00665), RVT-GII, GIIM (pfam08388), PAS (smart00091)

Seq: QHXE01000789.1 Acidobacteria bacterium isolate gp4 AA28 14_0903_12_30cm_scaffold_44837_curated, whole genome shotgun sequence (4235 bp)
Overview 1 RT 1: 426-2646 bp Neighborhood of RT #1 [426, 2646] RVT-GII GIIM Feature: gene Location: 426-1598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 714-1374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 714-1374 bp Feature: domain Description: GIIM Note: maturase Location: 1449-1590 bp Feature: domain Description: GIIM Note: maturase Location: 1449-1590 bp Feature: gene Location: 1867-2106 bp Feature: gene Location: 2311-2646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QHXE01000896.1 Acidobacteria bacterium isolate gp4 AA28 14_0903_12_30cm_scaffold_48965_curated, whole genome shotgun sequence (1968 bp)
Overview 1 RT 1: 1-1712 bp Neighborhood of RT #1 [1, 1810] RVT-GII GIIM Feature: gene Location: 1-159 bp Feature: gene Location: 479-1810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 833-1457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 833-1457 bp Feature: domain Description: GIIM Note: maturase Location: 1499-1712 bp Feature: domain Description: GIIM Note: maturase Location: 1499-17 12 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QHXE01000770.1 Acidobacteria bacterium isolate gp4 AA28 14_0903_12_30cm_scaffold_51614_curated, whole genome shotgun sequence (1964 bp)
Overview 1 RT 1: 2-1257 bp Neighborhood of RT #1 [2, 1610] RVT-GII Feature: gene Location: 2-382 bp Feature: gene Location: 372-1610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 576-1257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 576-1257 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QHXE01000923.1 Acidobacteria bacterium isolate gp4 AA28 14_0903_12_30cm_scaffold_55343_curated, whole genome shotgun sequence (2219 bp)
Overview 1 RT 1: 162-2217 bp Neighborhood of RT #1 [162, 2217] RVT-GII GIIM Feature: gene Location: 162-1547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 519-1185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 519 -1185 bp Feature: domain Description: GIIM Note: maturase Location: 1257-1464 bp Feature: domain Description: GIIM Note: maturase Location: 1257-1464 bp Feature: gene Location: 1779-2072 bp Feature: gene Location: 2077-2217 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QHXE01001081.1 Acidobacteria bacterium isolate gp4 AA28 14_0903_12_30cm_scaffold_99798_curated, whole genome shotgun sequence (6592 bp)
Overview 1 RT 1: 2-4160 bp Neighborhood of RT #1 [2, 4174] RVT-GII RVT-GII xerC INT_RitB_C_like Feature: gene Location: 2-214 bp Feature: gene Location: 540-1346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 966-1152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 966-1152 bp Feature: gene Location: 1348-1953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1357-1567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1357-1567 bp Feature: gene Location: 2324-3292 bp Feature: domain Description: xerC Location: 2339-3050 bp Feature: domain Description: xerC Location: 2339-3050 bp Feature: gene Location: 3551-4174 bp Feature: domain Description: INT_RitB_C_like Location: 3863-4160 bp Feature: domain Description: INT_RitB_C_like Location: 3863-4160 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, xerC (PRK01287), INT_RitB_C_like (cd00797)

Seq: QHXE01000023.1 Acidobacteria bacterium isolate gp4 AA28 14_0903_12_30cm_scaffold_9998_curated, whole genome shotgun sequence (5727 bp)
Overview 1 RT 1: 1-2937 bp Neighborhood of RT #1 [1, 2937] PRK00192 RVT-GII GIIM DUF5372 Feature: gene Location: 1-144 bp Feature: gene Location: 281-1156 bp Feature: domain Description: PRK00192 Location: 371-1148 bp Feature: domain Description: PRK00192 Location: 371-11 48 bp Feature: gene Location: 1232-2233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1238-1805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1238-1805 bp Feature: domain Description: GIIM Note: maturase Location: 1859-2072 bp Feature: domain Description: GIIM Note: maturase Location: 1859-2072 bp Feature: gene Location: 2278-2553 bp Feature: domain Description: DUF5372 Location: 2296-2524 bp Feature: domain Description: DUF5372 Location: 2296-2524 bp Feature: gene Location: 2605-2937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00192 (mannosyl-3-phosphoglycerate phosphatase; Reviewed), RVT-GII, GIIM (pfam08388), DUF5372 (pfam17342)