myRT

myRT report for GCA_003223075.1_ASM322307v1

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Seq: QHXV01000509.1 Acidobacteria bacterium isolate gp3 AA110 14_1009_16_40cm_scaffold_109355_curated, whole genome shotgun sequence (3887 bp)
Overview 1 RT 1: 2-3490 bp Neighborhood of RT #1 [2, 3490] ATP-synt_Fo_b RVT-GII GIIM DUF772 Feature: gene Location: 2-478 bp Feature: domain Description: ATP-synt_Fo_b Location: 170-389 bp Feature: domain Description: ATP-synt_Fo_b Location: 1 70-389 bp Feature: gene Location: 680-2059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1031-1673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 031 -1 673 bp Feature: domain Description: GIIM Note: maturase Location: 1751-1964 bp Feature: domain Description: GIIM Note: maturase Location: 1 751 -1 964 bp Feature: gene Location: 2401-2958 bp Feature: domain Description: DUF772 Location: 2551-2716 bp Feature: domain Description: DUF772 Location: 2551 -271 6 bp Feature: gene Location: 2993-3490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ATP-synt_Fo_b (cd06503), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598)

Seq: QHXV01000613.1 Acidobacteria bacterium isolate gp3 AA110 14_1009_16_40cm_scaffold_125741_curated, whole genome shotgun sequence (3692 bp)
Overview 1 RT 1: 2-3571 bp Neighborhood of RT #1 [2, 3588] CarboxypepD_reg group_II_RT_mat RVT-GII Resolvase Recombinase Zn_ribbon_recom YafY arc_metj Feature: gene Location: 2-250 bp Feature: domain Description: CarboxypepD_reg Location: 74-251 bp Feature: domain Description: CarboxypepD_reg Location: 74-2 51 bp Feature: gene Location: 749-1063 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 758-944 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 758-944 bp Feature: gene Location: 1195-1347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1204-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 04-1333 bp Feature: gene Location: 1388-3097 bp Feature: domain Description: Resolvase Location: 1403-1844 bp Feature: domain Description: Resolvase Location: 1403-1844 bp Feature: domain Description: Recombinase Location: 1931-2291 bp Feature: domain Description: Recombinase Location: 1931-2 2 91 bp Feature: domain Description: Zn_ribbon_recom Location: 2330-2519 bp Feature: domain Description: Zn_ribbon_recom Location: 2 330-2 519 bp Feature: gene Location: 3259-3588 bp Feature: domain Description: YafY Location: 3283-3424 bp Feature: domain Description: YafY Location: 32 83-342 4 bp Feature: domain Description: arc_metj Location: 3457-3571 bp Feature: domain Description: arc_metj Location: 3457-3571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CarboxypepD_reg (pfam13620), group_II_RT_mat (TIGR04416), RVT-GII, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), YafY (COG2378), arc_metj (LOAD_arc_metj)

Seq: QHXV01000818.1 Acidobacteria bacterium isolate gp3 AA110 14_1009_16_40cm_scaffold_200589_curated, whole genome shotgun sequence (4070 bp)
Overview 1 RT 1: 1-3387 bp Neighborhood of RT #1 [1, 3387] RVT-GII GIIM COG3547 Feature: gene Location: 1-246 bp Feature: gene Location: 427-1731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 712-1351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 712-13 51 bp Feature: domain Description: GIIM Note: maturase Location: 1423-1642 bp Feature: domain Description: GIIM Note: maturase Location: 1423 -1642 bp Feature: gene Location: 1910-3001 bp Feature: domain Description: COG3547 Location: 2021-2888 bp Feature: domain Description: COG3 547 Location: 2021-2888 bp Feature: gene Location: 3244-3387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: QHXV01000835.1 Acidobacteria bacterium isolate gp3 AA110 14_1009_16_40cm_scaffold_202295_curated, whole genome shotgun sequence (4144 bp)
Overview 1 RT 1: 1-2051 bp Neighborhood of RT #1 [1, 2051] RVT-GII GIIM Feature: gene Location: 1-216 bp Feature: gene Location: 221-1525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 515-1112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 515-1112 bp Feature: domain Description: GIIM Note: maturase Location: 1217-1433 bp Feature: domain Description: GIIM Note: maturase Location: 1217-14 33 bp Feature: gene Location: 1518-1772 bp Feature: gene Location: 1842-2051 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QHXV01000850.1 Acidobacteria bacterium isolate gp3 AA110 14_1009_16_40cm_scaffold_214758_curated, whole genome shotgun sequence (2874 bp)
Overview 1 RT 1: 1-2586 bp Neighborhood of RT #1 [1, 2657] DUF772 DDE_Tnp_1_6 RVT-GII GIIM RVT-GII Feature: gene Location: 1-1122 bp Feature: domain Description: DUF772 Location: 4-151 bp Feature: domain Description: DUF772 Location: 4-15 1 bp Feature: domain Description: DDE_Tnp_1_6 Location: 727-1075 bp Feature: domain Description: DDE_Tnp_1_6 Location: 727-1075 bp Feature: gene Location: 1412-1876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1415-1499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1415 -1499 bp Feature: domain Description: GIIM Note: maturase Location: 1574-1778 bp Feature: domain Description: GIIM Note: maturase Location: 15 74-1778 bp Feature: gene Location: 1848-2657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2142-2586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2142-25 86 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF772 (pfam05598), DDE_Tnp_1_6 (pfam13751), RVT-GII, GIIM (pfam08388)

Seq: QHXV01000889.1 Acidobacteria bacterium isolate gp3 AA110 14_1009_16_40cm_scaffold_246339_curated, whole genome shotgun sequence (4294 bp)
Overview 1 RT 1: 1231-3678 bp Neighborhood of RT #1 [1231, 4082] AAK_NAGK-like PRK07757 PRK07757 RVT-GII Feature: gene Location: 1231-1578 bp Feature: domain Description: AAK_NAGK-like Location: 1237-1570 bp Feature: domain Description: AAK_NAGK-like Location: 1237-1570 bp Feature: gene Location: 1650-2108 bp Feature: domain Description: PRK07757 Location: 1653-1737 bp Feature: domain Description: PRK07757 Location: 16 53-1737 bp Feature: domain Description: PRK07757 Location: 1767-2028 bp Feature: domain Description: PRK07757 Location: 176 7-2028 bp Feature: gene Location: 2562-4082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2988-3678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2988-36 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAK_NAGK-like (cd04238), PRK07757 (N-acetyltransferase), RVT-GII

Seq: QHXV01000154.1 Acidobacteria bacterium isolate gp3 AA110 14_1009_16_40cm_scaffold_48984_curated, whole genome shotgun sequence (11482 bp)
Overview 1 RT 1: 3193-7348 bp Neighborhood of RT #1 [3193, 7348] major_cap_HK97 RVT-GII Peptidase_S78 Feature: gene Location: 3193-4485 bp Feature: domain Description: major_cap_HK97 Location: 3517-4429 bp Feature: domain Description: major_cap_HK97 Location: 3517 -4429 bp Feature: gene Location: 4531-4863 bp Feature: gene Location: 4860-6338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5274-5964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 527 4-5964 bp Feature: gene Location: 6444-6923 bp Feature: domain Description: Peptidase_S78 Location: 6546-6798 bp Feature: domain Description: Peptidase_S7 8 Location: 6546-67 98 bp Feature: gene Location: 7070-7348 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT major_cap_HK97 (TIGR01554), RVT-GII, Peptidase_S78 (pfam04586)