myRT

myRT report for GCA_003223245.1_ASM322324v1

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Seq: QHYI01000175.1 Acidobacteria bacterium isolate gp2 AA92 14_0919_09_20cm_scaffold_485_curated, whole genome shotgun sequence (20712 bp)
Overview 1 RT 1: 5912-11949 bp Neighborhood of RT #1 [5912, 12092] malate_synt_A RVT-GII PRK15063 ADOP Feature: gene Location: 5912-7510 bp Feature: domain Description: malate_synt_A Location: 6035-7499 bp Feature: domain Description: malate_synt_A Location: 6035-7499 bp Feature: gene Location: 7520-7753 bp Feature: gene Location: 7766-9244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8180-8870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 80-8870 bp Feature: gene Location: 9622-10998 bp Feature: domain Description: PRK15063 Location: 9703-10945 bp Feature: domain Description: PRK1 5063 Location: 9703-1 0945 bp Feature: gene Location: 11079-12092 bp Feature: domain Description: ADOP Location: 11154-11949 bp Feature: domain Description: ADOP Location: 1 1 1 54-1 1 949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ADOP (TIGR03434), malate_synt_A (cd00727), RVT-GII, PRK15063 (isocitrate lyase; Provisional)

Seq: QHYI01000102.1 Acidobacteria bacterium isolate gp2 AA92 14_0919_09_20cm_scaffold_5_curated, whole genome shotgun sequence (133359 bp)
Overview 1 RT 1: 90537-92841 bp Neighborhood of RT #1 [90537, 92876] DUF1905 OmdA OmdA RVT-GII STAS_anti-anti-sigma_factors Feature: gene Location: 90537-90926 bp Feature: gene Location: 90942-91679 bp Feature: domain Description: DUF1905 Location: 90978-91218 bp Feature: domain Description: DUF1905 Location: 90978-912 18 bp Feature: domain Description: OmdA Location: 91245-91410 bp Feature: domain Description: OmdA Location: 912 45-91410 bp Feature: domain Description: OmdA Location: 91434-91605 bp Feature: domain Description: OmdA Location: 91434-91605 bp Feature: gene Location: 91789-91959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91792-91930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91792 -91930 bp Feature: gene Location: 92335-92520 bp Feature: gene Location: 92529-92876 bp Feature: domain Description: STAS_anti-anti-sigma_factors Location: 92547-92841 bp Feature: domain Description: STAS_anti-anti-sigma_factors Location: 92 547-92 841 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1905 (pfam08922), OmdA (pfam13376), RVT-GII, STAS_anti-anti-sigma_factors (cd07043)

Seq: QHYI01000029.1 Acidobacteria bacterium isolate gp2 AA92 14_0919_09_20cm_scaffold_7590_curated, whole genome shotgun sequence (4253 bp)
Overview 1 RT 1: 2112-4248 bp Neighborhood of RT #1 [2112, 4250] COG5340 AbiEii RVT-GII Feature: gene Location: 2112-2714 bp Feature: domain Description: COG5340 Location: 2154-2613 bp Feature: domain Description: COG53 40 Location: 2154-2613 bp Feature: gene Location: 2711-3634 bp Feature: domain Description: AbiEii Location: 2828-3497 bp Feature: domain Description: AbiEii Location: 2828-3 497 bp Feature: gene Location: 3900-4250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3903-4248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 903 -4248 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843), RVT-GII