myRT

myRT report for GCA_003223325.1_ASM322332v1

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Seq: QHYS01000070.1 Acidobacteria bacterium isolate gp2 AA82 14_0903_13_30cm_scaffold_1055584_curated, whole genome shotgun sequence (9796 bp)
Overview 1 RT 1: 2-1851 bp Neighborhood of RT #1 [2, 2147] RVT-GII Smc Feature: gene Location: 2-826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338-824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338-824 bp Feature: gene Location: 830-1144 bp Feature: gene Location: 1293-2147 bp Feature: domain Description: Smc Location: 1416-1851 bp Feature: domain Description: Smc Location: 1 41 6-1 851 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Smc (COG1196), RVT-GII

Seq: QHYS01000009.1 Acidobacteria bacterium isolate gp2 AA82 14_0903_13_30cm_scaffold_180262_curated, whole genome shotgun sequence (57238 bp)
Overview 1 RT 1: 26-2744 bp Neighborhood of RT #1 [26, 2744] RVT-GII GIIM Feature: gene Location: 26-391 bp Feature: gene Location: 534-1859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 822-1482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 2 -1482 bp Feature: domain Description: GIIM Note: maturase Location: 1554-1758 bp Feature: domain Description: GIIM Note: maturase Location: 1554-1758 bp Feature: gene Location: 2057-2269 bp Feature: gene Location: 2427-2744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QHYS01000149.1 Acidobacteria bacterium isolate gp2 AA82 14_0903_13_30cm_scaffold_2204438_curated, whole genome shotgun sequence (13774 bp)
Overview 1 RT 1: 4254-8957 bp Neighborhood of RT #1 [4254, 8957] ANTAR Resolvase Recombinase Zn_ribbon_recom RVT-GII GIIM HTH_32 rve_3 Feature: gene Location: 4254-4583 bp Feature: domain Description: ANTAR Location: 4332-4413 bp Feature: domain Description: ANTAR Location: 43 3 2-4413 bp Feature: gene Location: 4724-6205 bp Feature: domain Description: Resolvase Location: 4739-5177 bp Feature: domain Description: Resolvase Location: 473 9-5177 bp Feature: domain Description: Recombinase Location: 5267-5627 bp Feature: domain Description: Recombinase Location: 5267-5627 bp Feature: domain Description: Zn_ribbon_recom Location: 5672-5858 bp Feature: domain Description: Zn_ribbon_recom Location: 5672-5858 bp Feature: gene Location: 6367-7032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6373-6607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63 73 -6607 bp Feature: domain Description: GIIM Note: maturase Location: 6655-6874 bp Feature: domain Description: GIIM Note: maturase Location: 6655-6874 bp Feature: gene Location: 7234-8265 bp Feature: domain Description: HTH_32 Location: 7459-7669 bp Feature: domain Description: HTH_3 2 Location: 7459-7669 bp Feature: domain Description: rve_3 Location: 7984-8176 bp Feature: domain Description: rve_3 Location: 7984-8176 bp Feature: gene Location: 8523-8957 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ANTAR (smart01012), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, GIIM (pfam08388), HTH_32 (pfam13565), rve_3 (pfam13683)

Seq: QHYS01000155.1 Acidobacteria bacterium isolate gp2 AA82 14_0903_13_30cm_scaffold_2401533_curated, whole genome shotgun sequence (30982 bp)
Overview 1 RT 1: 3-3278 bp Neighborhood of RT #1 [3, 3278] Resolvase Recombinase Zn_ribbon_recom ANTAR PHA02938 RVT-GII Feature: gene Location: 3-1097 bp Feature: domain Description: Resolvase Location: 18-459 bp Feature: domain Description: Resolvase Location: 18-4 59 bp Feature: domain Description: Recombinase Location: 546-906 bp Feature: domain Description: Recombinase Location: 54 6-906 bp Feature: domain Description: Zn_ribbon_recom Location: 951-1089 bp Feature: domain Description: Zn_ribbon_recom Location: 951-1089 bp Feature: gene Location: 1238-1573 bp Feature: domain Description: ANTAR Location: 1328-1403 bp Feature: domain Description: ANTAR Location: 1328-14 03 bp Feature: domain Description: PHA02938 Location: 1433-1553 bp Feature: domain Description: PHA02938 Location: 14 33-1553 bp Feature: gene Location: 1588-2412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1930-2338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1930-2338 bp Feature: gene Location: 2540-2671 bp Feature: gene Location: 3066-3278 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ANTAR (smart01012), PHA02938 (hypothetical protein; Provisional), RVT-GII, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)

Seq: QHYS01000277.1 Acidobacteria bacterium isolate gp2 AA82 14_0903_13_30cm_scaffold_5654570_curated, whole genome shotgun sequence (7251 bp)
Overview 1 RT 1: 5371-7089 bp Neighborhood of RT #1 [5371, 7250] PRK00192 RVT-GII GIIM Feature: gene Location: 5371-5559 bp Feature: gene Location: 5724-6599 bp Feature: domain Description: PRK00192 Location: 5814-6591 bp Feature: domain Description: PRK00192 Location: 5 814-65 91 bp Feature: gene Location: 6675-7250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6678-6822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6678-6822 bp Feature: domain Description: GIIM Note: maturase Location: 6876-7089 bp Feature: domain Description: GIIM Note: maturase Location: 6876-7089 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00192 (mannosyl-3-phosphoglycerate phosphatase; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: QHYS01000043.1 Acidobacteria bacterium isolate gp2 AA82 14_0903_13_30cm_scaffold_737129_curated, whole genome shotgun sequence (21132 bp)
Overview 1 RT 1: 385-4264 bp Neighborhood of RT #1 [385, 4332] RVT-GII Esterase_713_like-2 PLN02724 Feature: gene Location: 385-1947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 880-1570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 880-1570 bp Feature: gene Location: 2388-2873 bp Feature: domain Description: Esterase_713_like-2 Location: 2400-2784 bp Feature: domain Description: Esterase_713_like-2 Location: 2400-2784 bp Feature: gene Location: 2833-4332 bp Feature: domain Description: PLN02724 Location: 2902-4264 bp Feature: domain Description: PLN02724 Location: 2902-426 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Esterase_713_like-2 (cd12809), PLN02724 (Molybdenum cofactor sulfurase), RVT-GII

Seq: QHYS01000053.1 Acidobacteria bacterium isolate gp2 AA82 14_0903_13_30cm_scaffold_799115_e_2050_curated, whole genome shotgun sequence (50512 bp)
Overview 1 RT 1: 139-3139 bp Neighborhood of RT #1 [139, 3204] RVT-GII GIIM DAP2 DAP2 Feature: gene Location: 139-1566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484-1075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484-107 5 bp Feature: domain Description: GIIM Note: maturase Location: 1126-1342 bp Feature: domain Description: GIIM Note: maturase Location: 1126-1342 bp Feature: gene Location: 1832-2182 bp Feature: domain Description: DAP2 Location: 1835-2120 bp Feature: domain Description: DAP2 Location: 1835-2120 bp Feature: gene Location: 2137-3204 bp Feature: domain Description: DAP2 Location: 2233-3139 bp Feature: domain Description: DAP2 Location: 2233-3139 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DAP2 (COG1506)