myRT

myRT report for GCA_003223675.1_ASM322367v1

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Seq: QHVW01000021.1 Acidobacteria bacterium isolate gp7 AA5 14_0903_05_20cm_scaffold_15680_curated, whole genome shotgun sequence (3331 bp)
Overview 1 RT 1: 2-3014 bp Neighborhood of RT #1 [2, 3166] RVT-GII GIIM YcbJ Feature: gene Location: 2-1288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 305-986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 305-986 bp Feature: domain Description: GIIM Note: maturase Location: 1055-1271 bp Feature: domain Description: GIIM Note: maturase Location: 1 055-1 271 bp Feature: gene Location: 1997-3166 bp Feature: domain Description: YcbJ Location: 2441-3014 bp Feature: domain Description: YcbJ Location: 2441 -301 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YcbJ (COG3173)

Seq: QHVW01000800.1 Acidobacteria bacterium isolate gp7 AA5 14_0903_05_20cm_scaffold_9502_curated, whole genome shotgun sequence (6522 bp)
Overview 1 RT 1: 4125-5587 bp Neighborhood of RT #1 [4125, 6519] AbrB COG3905 RVT-UG12 Feature: gene Location: 4125-4388 bp Feature: domain Description: AbrB Location: 4131-4278 bp Feature: domain Description: AbrB Location: 4131-42 78 bp Feature: gene Location: 4538-4828 bp Feature: domain Description: COG3905 Location: 4556-4685 bp Feature: domain Description: COG3905 Location: 4556-4685 bp Feature: gene Location: 5317-6519 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 5323-5587 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 532 3-5587 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbrB (pfam05145), COG3905 (Predicted transcriptional regulator ), RVT-UG12