myRT

myRT report for GCA_003223875.1_ASM322387v1

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Seq: QHWY01000233.1 Acidobacteria bacterium isolate gp5 AA68 14_1009_16_30cm_scaffold_1328_curated, whole genome shotgun sequence (39031 bp)
Overview 1 RT 1: 27137-31002 bp Neighborhood of RT #1 [27137, 31002] BcsQ RVT-UG12 DUF4258 Feature: gene Location: 27137-28081 bp Feature: domain Description: BcsQ Location: 27140-28040 bp Feature: domain Description: BcsQ Location: 271 40-28040 bp Feature: gene Location: 28090-28356 bp Feature: gene Location: 28772-30307 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 29141-29567 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 291 41 -29567 bp Feature: gene Location: 30473-30793 bp Feature: domain Description: DUF4258 Location: 30530-30749 bp Feature: domain Description: DUF4258 Location: 30530-30749 bp Feature: gene Location: 30790-31002 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BcsQ (COG1192), RVT-UG12, DUF4258 (pfam14076)

Seq: QHWY01000434.1 Acidobacteria bacterium isolate gp5 AA68 14_1009_16_30cm_scaffold_164460_curated, whole genome shotgun sequence (3095 bp)
Overview 1 RT 1: 94-2373 bp Neighborhood of RT #1 [94, 2373] Resolvase RVT-GII GIIM Feature: gene Location: 94-258 bp Feature: gene Location: 639-791 bp Feature: domain Description: Resolvase Location: 648-786 bp Feature: domain Description: Resolvase Location: 648-786 bp Feature: gene Location: 916-1443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 919-1144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 919-1144 bp Feature: domain Description: GIIM Note: maturase Location: 1192-1357 bp Feature: domain Description: GIIM Note: maturase Location: 1192 -1357 bp Feature: gene Location: 1689-1856 bp Feature: gene Location: 1933-2373 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), RVT-GII, GIIM (pfam08388)

Seq: QHWY01000133.1 Acidobacteria bacterium isolate gp5 AA68 14_1009_16_30cm_scaffold_16688_curated, whole genome shotgun sequence (10011 bp)
Overview 1 RT 1: 8103-9900 bp Neighborhood of RT #1 [8103, 10010] Phage_holin_4_2 RVT-GII GIIM Feature: gene Location: 8103-8456 bp Feature: domain Description: Phage_holin_4_2 Location: 8106-8415 bp Feature: domain Description: Phage_holin_4_2 Location: 8106-8415 bp Feature: gene Location: 8545-8799 bp Feature: gene Location: 9219-10010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9225-9624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9225-9624 bp Feature: domain Description: GIIM Note: maturase Location: 9714-9900 bp Feature: domain Description: GIIM Note: maturase Location: 9714-9900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_4_2 (pfam04020), RVT-GII, GIIM (pfam08388)