myRT

myRT report for GCA_003223975.1_ASM322397v1

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Seq: QHXS01000156.1 Acidobacteria bacterium isolate gp4 AA14 14_0903_02_30cm_scaffold_27646_curated, whole genome shotgun sequence (4929 bp)
Overview 1 RT 1: 385-3412 bp Neighborhood of RT #1 [385, 4521] RVT-CRISPR-like RNase_HI_RT_DIRS1 Feature: gene Location: 385-1485 bp Feature: gene Location: 1557-1904 bp Feature: gene Location: 1933-4521 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2482-2698 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2482-2698 bp Feature: domain Description: RNase_HI_RT_DIRS1 Location: 3064-3412 bp Feature: domain Description: RNase_HI_RT_DIRS1 Location: 3064-341 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, RNase_HI_RT_DIRS1 (cd09275)

Seq: QHXS01000245.1 Acidobacteria bacterium isolate gp4 AA14 14_0903_02_30cm_scaffold_35087_curated, whole genome shotgun sequence (3902 bp)
Overview 1 RT 1: 1-3572 bp Neighborhood of RT #1 [1, 3733] R1-I-EN RVT-GII Feature: gene Location: 1-1710 bp Feature: gene Location: 1703-3733 bp Feature: domain Description: R1-I-EN Location: 1727-2399 bp Feature: domain Description: R1-I-EN Location: 172 7-2 399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3236-3572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 36-3572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT R1-I-EN (cd09077), RVT-GII

Seq: QHXS01000254.1 Acidobacteria bacterium isolate gp4 AA14 14_0903_02_30cm_scaffold_40490_curated, whole genome shotgun sequence (4718 bp)
Overview 1 RT 1: 1-4323 bp Neighborhood of RT #1 [1, 4715] Rnase_HI_RT_non_LTR RVT-CRISPR-like Exo_endo_phos_2 AIR1 Feature: gene Location: 1-996 bp Feature: domain Description: Rnase_HI_RT_non_LTR Location: 274-694 bp Feature: domain Description: Rnase_HI_RT_non_LTR Location: 274-694 bp Feature: gene Location: 1029-2756 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1899-2280 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1899-2280 bp Feature: gene Location: 2459-3664 bp Feature: domain Description: Exo_endo_phos_2 Location: 2801-3146 bp Feature: domain Description: Exo_endo_phos_2 Location: 2801-3 146 bp Feature: gene Location: 3963-4715 bp Feature: domain Description: AIR1 Location: 4179-4323 bp Feature: domain Description: AIR1 Location: 4179-43 23 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rnase_HI_RT_non_LTR (cd09276), RVT-CRISPR, Exo_endo_phos_2 (pfam14529), AIR1 (COG5082)