myRT

myRT report for GCA_003224135.1_ASM322413v1

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Seq: QHYO01000308.1 Acidobacteria bacterium isolate gp2 AA86 14_0903_13_30cm_scaffold_2723032_curated, whole genome shotgun sequence (18486 bp)
Overview 1 RT 1: 17237-18482 bp Neighborhood of RT #1 [17237, 18484] DUF5372 RVT-GII Feature: gene Location: 17237-17569 bp Feature: gene Location: 17625-17897 bp Feature: domain Description: DUF5372 Location: 17643-17871 bp Feature: domain Description: DUF5372 Location: 1 7643-1 7871 bp Feature: gene Location: 17915-18484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17930-18482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7930-1 8482 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5372 (pfam17342), RVT-GII

Seq: QHYO01000342.1 Acidobacteria bacterium isolate gp2 AA86 14_0903_13_30cm_scaffold_3051684_curated, whole genome shotgun sequence (2536 bp)
Overview 1 RT 1: 1-2387 bp Neighborhood of RT #1 [1, 2533] COG5659 RVT-GII RVT-GII Feature: gene Location: 1-291 bp Feature: domain Description: COG5659 Location: 64-190 bp Feature: domain Description: COG5659 Location: 64-190 bp Feature: gene Location: 429-728 bp Feature: gene Location: 758-1267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 872-989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 872 -989 bp Feature: gene Location: 1225-1551 bp Feature: gene Location: 1580-2533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1757-2387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1757-2 387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5659 (SRSO17 transposase ), RVT-GII

Seq: QHYO01000390.1 Acidobacteria bacterium isolate gp2 AA86 14_0903_13_30cm_scaffold_3448308_curated, whole genome shotgun sequence (9027 bp)
Overview 1 RT 1: 5997-8944 bp Neighborhood of RT #1 [5997, 9024] AcrR SYLF RVT-GII Feature: gene Location: 5997-6677 bp Feature: domain Description: AcrR Location: 6054-6636 bp Feature: domain Description: AcrR Location: 6054-663 6 bp Feature: gene Location: 6795-7505 bp Feature: domain Description: SYLF Location: 6879-7464 bp Feature: domain Description: SYLF Location: 6879-7464 bp Feature: gene Location: 7549-9024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8254-8944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8254-8944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), SYLF (COG2930), RVT-GII

Seq: QHYO01000517.1 Acidobacteria bacterium isolate gp2 AA86 14_0903_13_30cm_scaffold_5123153_curated, whole genome shotgun sequence (2217 bp)
Overview 1 RT 1: 555-1707 bp Neighborhood of RT #1 [555, 2153] RVT-GII Feature: gene Location: 555-2153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1038-1707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1038-1707 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QHYO01000575.1 Acidobacteria bacterium isolate gp2 AA86 14_0903_13_30cm_scaffold_6102762_curated, whole genome shotgun sequence (1348 bp)
Overview 1 RT 1: 77-974 bp Neighborhood of RT #1 [77, 1345] RVT-GII Feature: gene Location: 77-1345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 284-974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 284-974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QHYO01000726.1 Acidobacteria bacterium isolate gp2 AA86 14_0903_13_30cm_scaffold_9340840_curated, whole genome shotgun sequence (2476 bp)
Overview 1 RT 1: 405-2476 bp Neighborhood of RT #1 [405, 2475] RVT-GII GIIM DDE_Tnp_1_4 Feature: gene Location: 405-1730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 693-1353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 93-1353 bp Feature: domain Description: GIIM Note: maturase Location: 1431-1638 bp Feature: domain Description: GIIM Note: maturase Location: 1431-16 38 bp Feature: gene Location: 1972-2475 bp Feature: domain Description: DDE_Tnp_1_4 Location: 2008-2476 bp Feature: domain Description: DDE_Tnp_1_4 Location: 2008-2476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_4 (pfam13701), RVT-GII, GIIM (pfam08388)