myRT

myRT report for GCA_003224525.1_ASM322452v1

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Seq: QHZB01000080.1 Acidobacteria bacterium isolate gp2 AA102 14_0903_13_20cm_scaffold_1386_curated, whole genome shotgun sequence (14614 bp)
Overview 1 RT 1: 4126-14239 bp Neighborhood of RT #1 [4126, 14241] ADOP RVT-GII ADOP ADOP Feature: gene Location: 4126-6882 bp Feature: domain Description: ADOP Location: 4366-6880 bp Feature: domain Description: ADOP Location: 4366-6880 bp Feature: gene Location: 6973-7248 bp Feature: gene Location: 7229-8728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7658-8348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7658-8348 bp Feature: gene Location: 8809-11478 bp Feature: domain Description: ADOP Location: 9049-11476 bp Feature: domain Description: ADOP Location: 9049-1 1 476 bp Feature: gene Location: 11485-14241 bp Feature: domain Description: ADOP Location: 11725-14239 bp Feature: domain Description: ADOP Location: 1 1 725-1 4239 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ADOP (TIGR03434), RVT-GII

Seq: QHZB01000354.1 Acidobacteria bacterium isolate gp2 AA102 14_0903_13_20cm_scaffold_2594_curated, whole genome shotgun sequence (11293 bp)
Overview 1 RT 1: 4070-7469 bp Neighborhood of RT #1 [4070, 7486] PhdYeFM_antitox PIN_VapC4-5_FitB-like RVT-GII HAD_sEH-N_like FMN_dh Feature: gene Location: 4070-4378 bp Feature: domain Description: PhdYeFM_antitox Location: 4133-4295 bp Feature: domain Description: PhdYeFM_antitox Location: 4133-42 95 bp Feature: gene Location: 4444-4800 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 4450-4792 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 4450-4792 bp Feature: gene Location: 4986-5225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5064-5199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5064-5199 bp Feature: gene Location: 5596-6234 bp Feature: domain Description: HAD_sEH-N_like Location: 5620-6202 bp Feature: domain Description: HAD_sEH-N_like Location: 562 0-62 02 bp Feature: gene Location: 6278-7486 bp Feature: domain Description: FMN_dh Location: 6374-7469 bp Feature: domain Description: FMN_dh Location: 6374-7469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhdYeFM_antitox (pfam02604), PIN_VapC4-5_FitB-like (cd18754), RVT-GII, HAD_sEH-N_like (cd02603), FMN_dh (pfam01070)

Seq: QHZB01000452.1 Acidobacteria bacterium isolate gp2 AA102 14_0903_13_20cm_scaffold_40138_curated, whole genome shotgun sequence (2482 bp)
Overview 1 RT 1: 1-2337 bp Neighborhood of RT #1 [1, 2480] RVT-GII GIIM COG5421 Feature: gene Location: 1-162 bp Feature: gene Location: 308-514 bp Feature: gene Location: 511-1836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 799-1459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 799-1459 bp Feature: domain Description: GIIM Note: maturase Location: 1528-1741 bp Feature: domain Description: GIIM Note: maturase Location: 1528-1741 bp Feature: gene Location: 2058-2480 bp Feature: domain Description: COG5421 Location: 2073-2337 bp Feature: domain Description: COG5421 Location: 2073 -23 3 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG5421 (Transposase )

Seq: QHZB01000024.1 Acidobacteria bacterium isolate gp2 AA102 14_0903_13_20cm_scaffold_5924_curated, whole genome shotgun sequence (14255 bp)
Overview 1 RT 1: 1-6946 bp Neighborhood of RT #1 [1, 6948] RVT-GII PinE Zn_ribbon_recom HTH_17 HTH_17 RVT-GII GIIM group_II_RT_mat ADOP Feature: gene Location: 1-312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67-307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67-307 bp Feature: gene Location: 320-2524 bp Feature: domain Description: PinE Location: 365-959 bp Feature: domain Description: PinE Location: 365-959 bp Feature: domain Description: Zn_ribbon_recom Location: 1313-1484 bp Feature: domain Description: Zn_ribbon_recom Location: 1313-14 84 bp Feature: domain Description: HTH_17 Location: 2201-2312 bp Feature: domain Description: HTH_17 Location: 2201-2312 bp Feature: domain Description: HTH_17 Location: 2393-2489 bp Feature: domain Description: HTH_17 Location: 2393-24 89 bp Feature: gene Location: 2665-2946 bp Feature: gene Location: 3039-3821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3045-3414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304 5-34 14 bp Feature: domain Description: GIIM Note: maturase Location: 3525-3747 bp Feature: domain Description: GIIM Note: maturase Location: 3525-374 7 bp Feature: gene Location: 3856-4353 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4129-4318 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4 129-4 318 bp Feature: gene Location: 4519-6948 bp Feature: domain Description: ADOP Location: 4531-6946 bp Feature: domain Description: ADOP Location: 4 531-694 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PinE (COG1961), Zn_ribbon_recom (pfam13408), HTH_17 (pfam12728), GIIM (pfam08388), group_II_RT_mat (TIGR04416), ADOP (TIGR03434)

Seq: QHZB01000039.1 Acidobacteria bacterium isolate gp2 AA102 14_0903_13_20cm_scaffold_9815_curated, whole genome shotgun sequence (10980 bp)
Overview 1 RT 1: 3-1632 bp Neighborhood of RT #1 [3, 1632] RVT-GII Feature: gene Location: 3-572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-5 67 bp Feature: gene Location: 824-997 bp Feature: gene Location: 1303-1632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII