myRT

myRT report for GCA_003225005.1_ASM322500v1

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Seq: QIAN01000512.1 Acidobacteria bacterium isolate gp1 AA128 14_0903_13_30cm_scaffold_10999689_curated, whole genome shotgun sequence (2582 bp)
Overview 1 RT 1: 557-2579 bp Neighborhood of RT #1 [557, 2579] RVT-GII Feature: gene Location: 557-718 bp Feature: gene Location: 864-2159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1134-1809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 34-1 809 bp Feature: gene Location: 2239-2394 bp Feature: gene Location: 2400-2579 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QIAN01000160.1 Acidobacteria bacterium isolate gp1 AA128 14_0903_13_30cm_scaffold_1643732_curated, whole genome shotgun sequence (2709 bp)
Overview 1 RT 1: 275-2355 bp Neighborhood of RT #1 [275, 2708] RVT-GII Feature: gene Location: 275-760 bp Feature: gene Location: 1260-1391 bp Feature: gene Location: 1416-2708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1671-2355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1671-2 355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QIAN01000220.1 Acidobacteria bacterium isolate gp1 AA128 14_0903_13_30cm_scaffold_2310520_curated, whole genome shotgun sequence (15607 bp)
Overview 1 RT 1: 1021-4667 bp Neighborhood of RT #1 [1021, 4667] tolB tolB tolB STKc_PknB_like RVT-GII GIIM Feature: gene Location: 1021-2751 bp Feature: domain Description: tolB Location: 1414-1726 bp Feature: domain Description: tolB Location: 1414-1726 bp Feature: domain Description: tolB Location: 2188-2320 bp Feature: domain Description: tolB Location: 2188-23 20 bp Feature: domain Description: tolB Location: 2395-2641 bp Feature: domain Description: tolB Location: 23 95-2641 bp Feature: gene Location: 2748-3269 bp Feature: domain Description: STKc_PknB_like Location: 2757-3258 bp Feature: domain Description: STKc_PknB_like Location: 2757-3 258 bp Feature: gene Location: 3523-3918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3640-3889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 640-3 889 bp Feature: gene Location: 3915-4262 bp Feature: domain Description: GIIM Note: maturase Location: 3966-4176 bp Feature: domain Description: GIIM Note: maturase Location: 3 966-4176 bp Feature: gene Location: 4503-4667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT tolB (PRK05137), STKc_PknB_like (cd14014), RVT-GII, GIIM (pfam08388)

Seq: QIAN01000225.1 Acidobacteria bacterium isolate gp1 AA128 14_0903_13_30cm_scaffold_2362515_curated, whole genome shotgun sequence (2259 bp)
Overview 1 RT 1: 562-1846 bp Neighborhood of RT #1 [562, 1941] RVT-GII GIIM Feature: gene Location: 562-1941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913-1555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913-1555 bp Feature: domain Description: GIIM Note: maturase Location: 1636-1846 bp Feature: domain Description: GIIM Note: maturase Location: 1636-184 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QIAN01000245.1 Acidobacteria bacterium isolate gp1 AA128 14_0903_13_30cm_scaffold_2610779_curated, whole genome shotgun sequence (2254 bp)
Overview 1 RT 1: 491-2026 bp Neighborhood of RT #1 [491, 2031] RVT_N RVT-GII Feature: gene Location: 491-733 bp Feature: gene Location: 844-1122 bp Feature: gene Location: 1270-2031 bp Feature: domain Description: RVT_N Location: 1321-1564 bp Feature: domain Description: RVT_N Location: 1321-15 64 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1609-2026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1609-2026 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: QIAN01000264.1 Acidobacteria bacterium isolate gp1 AA128 14_0903_13_30cm_scaffold_2865836_curated, whole genome shotgun sequence (8762 bp)
Overview 1 RT 1: 5921-8590 bp Neighborhood of RT #1 [5921, 8760] RVT-GII RVT-GII Feature: gene Location: 5921-6049 bp Feature: gene Location: 6490-6765 bp Feature: gene Location: 6845-7210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7049-7160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7049-716 0 bp Feature: gene Location: 7304-7696 bp Feature: gene Location: 7720-8760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7936-8590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7936 -8590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QIAN01000013.1 Acidobacteria bacterium isolate gp1 AA128 14_0903_13_30cm_scaffold_31428_curated, whole genome shotgun sequence (45140 bp)
Overview 1 RT 1: 26632-32798 bp Neighborhood of RT #1 [26632, 32893] COG2936 2-Hacid_dh_8 RVT-GII DHDPS-like Feature: gene Location: 26632-28434 bp Feature: domain Description: COG2936 Location: 26719-28426 bp Feature: domain Description: COG2936 Location: 267 19-28426 bp Feature: gene Location: 28497-29531 bp Feature: domain Description: 2-Hacid_dh_8 Location: 28524-29481 bp Feature: domain Description: 2-Hacid_dh_8 Location: 28524-29481 bp Feature: gene Location: 29831-31297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30242-30926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30242-30926 bp Feature: gene Location: 31684-31857 bp Feature: gene Location: 31946-32893 bp Feature: domain Description: DHDPS-like Location: 32003-32798 bp Feature: domain Description: DHDPS-like Location: 32003-327 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2936 (Predicted acyl esterase ), 2-Hacid_dh_8 (cd12167), RVT-GII, DHDPS-like (cd00408)

Seq: QIAN01000297.1 Acidobacteria bacterium isolate gp1 AA128 14_0903_13_30cm_scaffold_3925192_curated, whole genome shotgun sequence (2749 bp)
Overview 1 RT 1: 7-2659 bp Neighborhood of RT #1 [7, 2748] RVT-GII GIIM TonB_C TonB_C Feature: gene Location: 7-1278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331-949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331-949 bp Feature: domain Description: GIIM Note: maturase Location: 991-1222 bp Feature: domain Description: GIIM Note: maturase Location: 991-1222 bp Feature: gene Location: 1512-1718 bp Feature: gene Location: 2104-2748 bp Feature: domain Description: TonB_C Location: 2215-2362 bp Feature: domain Description: TonB_C Location: 2215-2362 bp Feature: domain Description: TonB_C Location: 2488-2659 bp Feature: domain Description: TonB_C Location: 248 8 -2659 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TonB_C (pfam03544)

Seq: QIAN01000310.1 Acidobacteria bacterium isolate gp1 AA128 14_0903_13_30cm_scaffold_4232537_curated, whole genome shotgun sequence (23990 bp)
Overview 1 RT 1: 21597-23989 bp Neighborhood of RT #1 [21597, 23989] RVT-GII Feature: gene Location: 21597-21830 bp Feature: gene Location: 22209-22373 bp Feature: gene Location: 22411-23391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22618-23218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22618-23218 bp Feature: gene Location: 23412-23804 bp Feature: gene Location: 23861-23989 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QIAN01000344.1 Acidobacteria bacterium isolate gp1 AA128 14_0903_13_30cm_scaffold_4825253_curated, whole genome shotgun sequence (2295 bp)
Overview 1 RT 1: 1-1596 bp Neighborhood of RT #1 [1, 2246] RVT_N RVT-GII Peptidase_M48 Feature: gene Location: 1-444 bp Feature: domain Description: RVT_N Location: 52-295 bp Feature: domain Description: RVT_N Location: 52-295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 340-445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 340-445 bp Feature: gene Location: 758-1033 bp Feature: gene Location: 1080-2246 bp Feature: domain Description: Peptidase_M48 Location: 1083-1596 bp Feature: domain Description: Peptidase_M48 Location: 10 83-1596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, Peptidase_M48 (pfam01435)

Seq: QIAN01000052.1 Acidobacteria bacterium isolate gp1 AA128 14_0903_13_30cm_scaffold_493827_curated, whole genome shotgun sequence (14351 bp)
Overview 1 RT 1: 6402-9057 bp Neighborhood of RT #1 [6402, 9104] AtoC GIIM RVT-GII HTH_17 Feature: gene Location: 6402-6788 bp Feature: domain Description: AtoC Location: 6447-6687 bp Feature: domain Description: AtoC Location: 6447-6687 bp Feature: gene Location: 6954-7271 bp Feature: domain Description: GIIM Note: maturase Location: 6963-7125 bp Feature: domain Description: GIIM Note: maturase Location: 6963-7125 bp Feature: gene Location: 7277-8254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7622-8195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7622-8195 bp Feature: gene Location: 8267-8449 bp Feature: gene Location: 8859-9104 bp Feature: domain Description: HTH_17 Location: 8910-9057 bp Feature: domain Description: HTH_17 Location: 8910-9057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AtoC (COG2204), GIIM (pfam08388), RVT-GII, HTH_17 (pfam12728)

Seq: QIAN01000404.1 Acidobacteria bacterium isolate gp1 AA128 14_0903_13_30cm_scaffold_6425663_curated, whole genome shotgun sequence (3143 bp)
Overview 1 RT 1: 174-3116 bp Neighborhood of RT #1 [174, 3142] PinE Zn_ribbon_recom HTH_17 HTH_17 RVT-GII Feature: gene Location: 174-2399 bp Feature: domain Description: PinE Location: 219-810 bp Feature: domain Description: PinE Location: 219-810 bp Feature: domain Description: Zn_ribbon_recom Location: 1188-1350 bp Feature: domain Description: Zn_ribbon_recom Location: 1188-1350 bp Feature: domain Description: HTH_17 Location: 2082-2187 bp Feature: domain Description: HTH_17 Location: 2082-2187 bp Feature: domain Description: HTH_17 Location: 2247-2361 bp Feature: domain Description: HTH_17 Location: 2247-2361 bp Feature: gene Location: 2894-3142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2906-3116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2906-3116 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), Zn_ribbon_recom (pfam13408), HTH_17 (pfam12728), RVT-GII

Seq: QIAN01000066.1 Acidobacteria bacterium isolate gp1 AA128 14_0903_13_30cm_scaffold_685671_curated, whole genome shotgun sequence (3020 bp)
Overview 1 RT 1: 251-2838 bp Neighborhood of RT #1 [251, 2838] INT_ICEBs1_C_like RVT-GII group_II_RT_mat RVT-GII Feature: gene Location: 251-589 bp Feature: domain Description: INT_ICEBs1_C_like Location: 290-503 bp Feature: domain Description: INT_ICEBs1_C_like Location: 290-503 bp Feature: gene Location: 604-774 bp Feature: gene Location: 1329-2072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1335-1725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 35-1725 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1740-1932 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1740-1932 bp Feature: gene Location: 2126-2464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2303-2372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2303-2372 bp Feature: gene Location: 2503-2838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), RVT-GII, group_II_RT_mat (TIGR04416)

Seq: QIAN01000423.1 Acidobacteria bacterium isolate gp1 AA128 14_0903_13_30cm_scaffold_7174581_curated, whole genome shotgun sequence (2229 bp)
Overview 1 RT 1: 291-2100 bp Neighborhood of RT #1 [291, 2100] RVT-GII GIIM Feature: gene Location: 291-1613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 579-1236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 579-1236 bp Feature: domain Description: GIIM Note: maturase Location: 1305-1521 bp Feature: domain Description: GIIM Note: maturase Location: 1305-1521 bp Feature: gene Location: 1639-2100 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QIAN01000488.1 Acidobacteria bacterium isolate gp1 AA128 14_0903_13_30cm_scaffold_9639974_curated, whole genome shotgun sequence (6482 bp)
Overview 1 RT 1: 3173-6428 bp Neighborhood of RT #1 [3173, 6481] RVT-GII Feature: gene Location: 3173-3784 bp Feature: gene Location: 3822-4943 bp Feature: gene Location: 5183-6481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5819-6428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5819-6428 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII