myRT

myRT report for GCA_003225035.1_ASM322503v1

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Seq: QIAO01000160.1 Acidobacteria bacterium isolate gp1 AA127 14_0903_13_30cm_scaffold_2288236_curated, whole genome shotgun sequence (22489 bp)
Overview 1 RT 1: 13985-17352 bp Neighborhood of RT #1 [13985, 17352] pro_imino_pep_2 protocat_pcaD RVT-GII RVT-GII PLN02578 Feature: gene Location: 13985-14272 bp Feature: domain Description: pro_imino_pep_2 Location: 14012-14219 bp Feature: domain Description: pro_imino_pep_2 Location: 1 401 2-1 421 9 bp Feature: gene Location: 14355-14663 bp Feature: domain Description: protocat_pcaD Location: 14376-14535 bp Feature: domain Description: protocat_pcaD Location: 1 4376-1 4535 bp Feature: gene Location: 14716-15594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14722-15214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4722-1 521 4 bp Feature: gene Location: 15664-16278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16156-16273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 61 56-1 6273 bp Feature: gene Location: 16500-16748 bp Feature: domain Description: PLN02578 Location: 16533-16683 bp Feature: domain Description: PLN02578 Location: 1 6533-1 6683 bp Feature: gene Location: 16885-17352 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pro_imino_pep_2 (TIGR01250), protocat_pcaD (TIGR02427), RVT-GII, PLN02578 (hydrolase)

Seq: QIAO01000175.1 Acidobacteria bacterium isolate gp1 AA127 14_0903_13_30cm_scaffold_2601436_curated, whole genome shotgun sequence (11373 bp)
Overview 1 RT 1: 4030-9886 bp Neighborhood of RT #1 [4030, 9886] Sortilin-Vps10 Sortilin-Vps10 Sortilin-Vps10 Sortilin-Vps10 Sortilin-Vps10 RVT-GII RVT-GII GIIM RHOD_PspE2 Feature: gene Location: 4030-6042 bp Feature: domain Description: Sortilin-Vps10 Location: 4126-4345 bp Feature: domain Description: Sortilin-Vps10 Location: 412 6-4345 bp Feature: domain Description: Sortilin-Vps10 Location: 4375-4681 bp Feature: domain Description: Sortilin-Vps10 Location: 4375-4681 bp Feature: domain Description: Sortilin-Vps10 Location: 4903-5221 bp Feature: domain Description: Sortilin-Vps10 Location: 4903-52 2 1 bp Feature: domain Description: Sortilin-Vps10 Location: 5494-5671 bp Feature: domain Description: Sortilin-Vps10 Location: 5494-5671 bp Feature: domain Description: Sortilin-Vps10 Location: 5737-5902 bp Feature: domain Description: Sortilin-Vps10 Location: 5737-5902 bp Feature: gene Location: 6268-6978 bp Feature: gene Location: 7516-8304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7867-8251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7867-82 51 bp Feature: gene Location: 8304-8834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8307-8406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8307-8406 bp Feature: domain Description: GIIM Note: maturase Location: 8463-8670 bp Feature: domain Description: GIIM Note: maturase Location: 8463-8670 bp Feature: gene Location: 8990-9205 bp Feature: domain Description: RHOD_PspE2 Location: 9014-9200 bp Feature: domain Description: RHOD_PspE2 Location: 9014-92 00 bp Feature: gene Location: 9707-9886 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Sortilin-Vps10 (pfam15902), RVT-GII, GIIM (pfam08388), RHOD_PspE2 (cd01521)

Seq: QIAO01000069.1 Acidobacteria bacterium isolate gp1 AA127 14_0903_13_30cm_scaffold_750911_curated, whole genome shotgun sequence (20377 bp)
Overview 1 RT 1: 17329-20327 bp Neighborhood of RT #1 [17329, 20374] FieF VirB4 RVT-GII RVT-GII Feature: gene Location: 17329-17946 bp Feature: domain Description: FieF Location: 17371-17929 bp Feature: domain Description: FieF Location: 173 71-17929 bp Feature: gene Location: 18184-18630 bp Feature: domain Description: VirB4 Location: 18187-18571 bp Feature: domain Description: VirB4 Location: 18187-18571 bp Feature: gene Location: 19126-19713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19129-19339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19129-193 3 9 bp Feature: gene Location: 19697-20374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19961-20327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19961-203 27 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FieF (COG0053), VirB4 (COG3451), RVT-GII

Seq: QIAO01000086.1 Acidobacteria bacterium isolate gp1 AA127 14_0903_13_30cm_scaffold_961163_curated, whole genome shotgun sequence (7604 bp)
Overview 1 RT 1: 4847-7520 bp Neighborhood of RT #1 [4847, 7603] HslR RVT-GII GIIM Feature: gene Location: 4847-5605 bp Feature: gene Location: 5869-6249 bp Feature: domain Description: HslR Location: 5881-6133 bp Feature: domain Description: HslR Location: 5881-6133 bp Feature: gene Location: 6398-7603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6596-7196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6596-7196 bp Feature: domain Description: GIIM Note: maturase Location: 7304-7520 bp Feature: domain Description: GIIM Note: maturase Location: 7304 -7520 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HslR (COG1188), RVT-GII, GIIM (pfam08388)