myRT

myRT report for GCA_003225055.1_ASM322505v1

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Seq: QIAU01000149.1 Acidobacteria bacterium isolate gp1 AA121 14_0903_12_30cm_scaffold_155_curated, whole genome shotgun sequence (90919 bp)
Overview 1 RT 1: 75-1676 bp Neighborhood of RT #1 [75, 1690] RVT_N RVT-GII PIN_MT3492-like Feature: gene Location: 75-584 bp Feature: RT Description: RVT_N Location: 126-369 bp Feature: RT Description: RVT_N Location: 1 26-369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 414-543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 4-543 bp Feature: gene Location: 869-1141 bp Feature: gene Location: 1271-1690 bp Feature: domain Description: PIN_MT3492-like Location: 1283-1676 bp Feature: domain Description: PIN_MT3492-like Location: 1 283-1 676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PIN_MT3492-like (cd09874), RVT_N (pfam13655), RVT-GII

Seq: QIAU01000030.1 Acidobacteria bacterium isolate gp1 AA121 14_0903_12_30cm_scaffold_29283_curated, whole genome shotgun sequence (3392 bp)
Overview 1 RT 1: 163-3012 bp Neighborhood of RT #1 [163, 3389] NHL_PAL_like rDP_like RVT-GII Feature: gene Location: 163-1242 bp Feature: domain Description: NHL_PAL_like Location: 256-1213 bp Feature: domain Description: NHL_PAL_like Location: 2 56-12 13 bp Feature: gene Location: 1335-2495 bp Feature: domain Description: rDP_like Location: 1497-2469 bp Feature: domain Description: rDP_like Location: 1497-2 469 bp Feature: gene Location: 2646-3389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2649-3012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 649-3012 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rDP_like (cd01301), NHL_PAL_like (cd14958), RVT-GII

Seq: QIAU01000183.1 Acidobacteria bacterium isolate gp1 AA121 14_0903_12_30cm_scaffold_487_e_4341_curated, whole genome shotgun sequence (69545 bp)
Overview 1 RT 1: 52854-57233 bp Neighborhood of RT #1 [52854, 57233] PRK08661 RVT-GII GIIM DUF5615 Feature: gene Location: 52854-54293 bp Feature: domain Description: PRK08661 Location: 52869-54291 bp Feature: domain Description: PRK08661 Location: 52869-54291 bp Feature: gene Location: 54514-54756 bp Feature: gene Location: 54841-56232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55186-55807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55186-55807 bp Feature: domain Description: GIIM Note: maturase Location: 55855-56086 bp Feature: domain Description: GIIM Note: maturase Location: 55855-56086 bp Feature: gene Location: 56590-56892 bp Feature: domain Description: DUF5615 Location: 56593-56749 bp Feature: domain Description: DUF5615 Location: 56593 -56749 bp Feature: gene Location: 56961-57233 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08661 (prolyl-tRNA synthetase; Provisional), RVT-GII, GIIM (pfam08388), DUF5615 (pfam18480)

Seq: QIAU01000184.1 Acidobacteria bacterium isolate gp1 AA121 14_0903_12_30cm_scaffold_517_curated, whole genome shotgun sequence (48885 bp)
Overview 1 RT 1: 19009-25326 bp Neighborhood of RT #1 [19009, 25331] DUF4185 DUF2961 RVT-GII PRK08628 Feature: gene Location: 19009-20760 bp Feature: domain Description: DUF4185 Location: 19438-20212 bp Feature: domain Description: DUF4 185 Location: 194 38-20212 bp Feature: gene Location: 20777-21907 bp Feature: domain Description: DUF2961 Location: 21038-21803 bp Feature: domain Description: DUF2961 Location: 21038-21803 bp Feature: gene Location: 22045-23355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22300-22987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22300-22987 bp Feature: gene Location: 24146-24313 bp Feature: gene Location: 24756-25331 bp Feature: domain Description: PRK08628 Location: 24879-25326 bp Feature: domain Description: PRK08628 Location: 24 879-25326 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4185 (pfam13810), DUF2961 (pfam11175), RVT-GII, PRK08628 (SDR family oxidoreductase)

Seq: QIAU01000194.1 Acidobacteria bacterium isolate gp1 AA121 14_0903_12_30cm_scaffold_611_curated, whole genome shotgun sequence (26945 bp)
Overview 1 RT 1: 330-5808 bp Neighborhood of RT #1 [330, 5858] RVT-GII GIIM TPR TPR TPR TPR_19 TPR_2 TPR TPR TPR TPR TPR_6 TPR TPR Feature: gene Location: 330-542 bp Feature: gene Location: 638-1900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 854-1514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85 4-15 14 bp Feature: domain Description: GIIM Note: maturase Location: 1595-1826 bp Feature: domain Description: GIIM Note: maturase Location: 15 95 -1826 bp Feature: gene Location: 2077-3660 bp Feature: domain Description: TPR Location: 2284-2554 bp Feature: domain Description: TPR Location: 2284-25 5 4 bp Feature: domain Description: TPR Location: 2788-2962 bp Feature: domain Description: TPR Location: 2788-2962 bp Feature: domain Description: TPR Location: 3163-3376 bp Feature: domain Description: TPR Location: 3163-3376 bp Feature: domain Description: TPR_19 Location: 3430-3565 bp Feature: domain Description: TPR_19 Location: 3430-35 65 bp Feature: gene Location: 3714-5858 bp Feature: domain Description: TPR_2 Location: 3825-3903 bp Feature: domain Description: TPR_2 Location: 3825 -3903 bp Feature: domain Description: TPR Location: 3912-4185 bp Feature: domain Description: TPR Location: 3912-4185 bp Feature: domain Description: TPR Location: 4212-4440 bp Feature: domain Description: TPR Location: 4212-4440 bp Feature: domain Description: TPR Location: 4488-4749 bp Feature: domain Description: TPR Location: 4488-4749 bp Feature: domain Description: TPR Location: 4887-5091 bp Feature: domain Description: TPR Location: 4887-5 091 bp Feature: domain Description: TPR_6 Location: 5148-5229 bp Feature: domain Description: TPR_6 Location: 5 148-5 229 bp Feature: domain Description: TPR Location: 5244-5520 bp Feature: domain Description: TPR Location: 5 244-5 5 20 bp Feature: domain Description: TPR Location: 5550-5808 bp Feature: domain Description: TPR Location: 5 5 5 0-5 808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), TPR_19 (pfam14559), TPR_2 (pfam07719), TPR_6 (pfam13174), RVT-GII, GIIM (pfam08388)

Seq: QIAU01000001.1 Acidobacteria bacterium isolate gp1 AA121 14_0903_12_30cm_scaffold_9090_curated, whole genome shotgun sequence (8433 bp)
Overview 1 RT 1: 4350-7724 bp Neighborhood of RT #1 [4350, 8329] DDE_Tnp_1_4 RVT-GII Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 4350-4832 bp Feature: domain Description: DDE_Tnp_1_4 Location: 4446-4791 bp Feature: domain Description: DDE_Tnp_1_4 Location: 4446 -4791 bp Feature: gene Location: 4936-5265 bp Feature: gene Location: 5342-6580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5684-6077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56 84-6 077 bp Feature: gene Location: 6593-8329 bp Feature: domain Description: Resolvase Location: 6608-7046 bp Feature: domain Description: Resolvase Location: 6 6 08-7046 bp Feature: domain Description: Recombinase Location: 7133-7493 bp Feature: domain Description: Recombinase Location: 7133-7493 bp Feature: domain Description: Zn_ribbon_recom Location: 7538-7724 bp Feature: domain Description: Zn_ribbon_recom Location: 7538-7724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_4 (pfam13701), RVT-GII, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)