myRT

myRT report for GCA_003225075.1_ASM322507v1

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Seq: QIAP01000017.1 Acidobacteria bacterium isolate gp1 AA126 14_0929_09_30cm_scaffold_1036_curated, whole genome shotgun sequence (20992 bp)
Overview 1 RT 1: 20012-20943 bp Neighborhood of RT #1 [20012, 20948] RVT-GII Feature: gene Location: 20012-20341 bp Feature: gene Location: 20447-20602 bp Feature: gene Location: 20601-20948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20877-20943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20877-20943 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QIAP01000129.1 Acidobacteria bacterium isolate gp1 AA126 14_0929_09_30cm_scaffold_19089_e_368.2_curated, whole genome shotgun sequence (2998 bp)
Overview 1 RT 1: 1-2916 bp Neighborhood of RT #1 [1, 2996] RVT-GII GIIM CspC PRK11561 Feature: gene Location: 1-870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-478 bp Feature: domain Description: GIIM Note: maturase Location: 562-769 bp Feature: domain Description: GIIM Note: maturase Location: 562 -769 bp Feature: gene Location: 972-1175 bp Feature: domain Description: CspC Location: 975-1170 bp Feature: domain Description: CspC Location: 975-1170 bp Feature: gene Location: 1557-2996 bp Feature: domain Description: PRK11561 Location: 1566-2916 bp Feature: domain Description: PRK11561 Location: 1566-2 916 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), CspC (COG1278), PRK11561 (isovaleryl CoA dehydrogenase; Provisional)

Seq: QIAP01000240.1 Acidobacteria bacterium isolate gp1 AA126 14_0929_09_30cm_scaffold_37890_curated, whole genome shotgun sequence (3094 bp)
Overview 1 RT 1: 2-2378 bp Neighborhood of RT #1 [2, 3001] L1-EN RVT-CRISPR-like Feature: gene Location: 2-3001 bp Feature: domain Description: L1-EN Location: 143-854 bp Feature: domain Description: L1-EN Location: 143 -854 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1742-2378 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1742-23 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-CRISPR

Seq: QIAP01000066.1 Acidobacteria bacterium isolate gp1 AA126 14_0929_09_30cm_scaffold_465_curated, whole genome shotgun sequence (35325 bp)
Overview 1 RT 1: 3-1091 bp Neighborhood of RT #1 [3, 1091] RVT-GII Feature: gene Location: 3-308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-213 bp Feature: gene Location: 336-584 bp Feature: gene Location: 780-1091 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QIAP01000206.1 Acidobacteria bacterium isolate gp1 AA126 14_0929_09_30cm_scaffold_8207_curated, whole genome shotgun sequence (12852 bp)
Overview 1 RT 1: 8346-12829 bp Neighborhood of RT #1 [8346, 12849] GT87 COG5349 RVT-GII GIIM RVT-GII GIIM RVT-CRISPR-like Feature: gene Location: 8346-9584 bp Feature: domain Description: GT87 Location: 8613-9291 bp Feature: domain Description: GT87 Location: 8613-9291 bp Feature: gene Location: 9690-10064 bp Feature: domain Description: COG5349 Location: 9720-9978 bp Feature: domain Description: COG5 349 Location: 9720-9978 bp Feature: gene Location: 10197-10727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10203-10302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10203-10302 bp Feature: domain Description: GIIM Note: maturase Location: 10350-10581 bp Feature: domain Description: GIIM Note: maturase Location: 1035 0-105 81 bp Feature: gene Location: 10951-12234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11242-11872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11242-11872 bp Feature: domain Description: GIIM Note: maturase Location: 11944-12157 bp Feature: domain Description: GIIM Note: maturase Location: 11944-1215 7 bp Feature: gene Location: 12301-12483 bp Feature: gene Location: 12715-12849 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 12718-12829 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 12718-12829 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT87 (pfam09594), COG5349 (Uncharacterized conserved protein, DUF983 family ), RVT-GII, GIIM (pfam08388), RVT-CRISPR