myRT

myRT report for GCA_003225175.1_ASM322517v1

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Seq: QIBA01000085.1 Acidobacteria bacterium isolate gp1 AA114 14_0929_05_20cm_scaffold_26122_curated, whole genome shotgun sequence (2654 bp)
Overview 1 RT 1: 2-1994 bp Neighborhood of RT #1 [2, 1994] RVT-UG17 RNase_HI_RT_Ty1 Feature: gene Location: 2-1231 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 74-245 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 74-245 bp Feature: domain Description: RNase_HI_RT_Ty1 Location: 677-1175 bp Feature: domain Description: RNase_HI_RT_Ty1 Location: 677-1 1 75 bp Feature: gene Location: 1228-1662 bp Feature: gene Location: 1776-1994 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, RNase_HI_RT_Ty1 (cd09272)

Seq: QIBA01000086.1 Acidobacteria bacterium isolate gp1 AA114 14_0929_05_20cm_scaffold_26174_curated, whole genome shotgun sequence (4357 bp)
Overview 1 RT 1: 2-3362 bp Neighborhood of RT #1 [2, 3904] eIF3G Asp_protease_2 RVT-UG11 RNase_HI_RT_Ty3 Integrase_H2C2 rve Feature: gene Location: 2-898 bp Feature: domain Description: eIF3G Location: 104-275 bp Feature: domain Description: eIF3G Location: 104-2 75 bp Feature: domain Description: Asp_protease_2 Location: 530-752 bp Feature: domain Description: Asp_protease_2 Location: 530-752 bp Feature: gene Location: 1157-2449 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1535-1658 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1535-1658 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 2069-2429 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 2 069-2 42 9 bp Feature: gene Location: 2651-3904 bp Feature: domain Description: Integrase_H2C2 Location: 2825-2987 bp Feature: domain Description: Integrase_H2 C2 Location: 2 82 5-2 987 bp Feature: domain Description: rve Location: 3032-3362 bp Feature: domain Description: rve Location: 3032 -3362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT eIF3G (cl13749), Asp_protease_2 (pfam13650), RVT-UG11, RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665)

Seq: QIBA01000211.1 Acidobacteria bacterium isolate gp1 AA114 14_0929_05_20cm_scaffold_75269_curated, whole genome shotgun sequence (1751 bp)
Overview 1 RT 1: 369-1608 bp Neighborhood of RT #1 [369, 1748] RVT-GII GIIM Feature: gene Location: 369-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 729-1362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 729-13 62 bp Feature: domain Description: GIIM Note: maturase Location: 1404-1608 bp Feature: domain Description: GIIM Note: maturase Location: 1404-1608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QIBA01000236.1 Acidobacteria bacterium isolate gp1 AA114 14_0929_05_20cm_scaffold_89262_curated, whole genome shotgun sequence (3703 bp)
Overview 1 RT 1: 3-3700 bp Neighborhood of RT #1 [3, 3700] RVT-UNC Feature: gene Location: 3-2189 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1380-1866 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1380-1866 bp Feature: gene Location: 2080-2277 bp Feature: gene Location: 2321-3700 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5/RVT-GII/RVT-DGRs/RVT-CRISPR(RVT-UNC)