myRT

myRT report for GCA_003225235.1_ASM322523v1

Download annotations/find similar RTs

Seq: QHYV01000950.1 Acidobacteria bacterium isolate gp2 AA108 14_0903_13_40cm_scaffold_138349_curated, whole genome shotgun sequence (2022 bp)
Overview 1 RT 1: 141-1574 bp Neighborhood of RT #1 [141, 1969] RVT-GII Feature: gene Location: 141-473 bp Feature: gene Location: 554-1969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 884-1574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 884-1 574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QHYV01000402.1 Acidobacteria bacterium isolate gp2 AA108 14_0903_13_40cm_scaffold_26580_curated, whole genome shotgun sequence (4166 bp)
Overview 1 RT 1: 1-2188 bp Neighborhood of RT #1 [1, 2199] RVT-GII TonB_C Feature: gene Location: 1-288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-2 53 bp Feature: gene Location: 541-888 bp Feature: gene Location: 1228-2199 bp Feature: domain Description: TonB_C Location: 1996-2188 bp Feature: domain Description: TonB_C Location: 1996-2 188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TonB_C (pfam03544), RVT-GII

Seq: QHYV01000409.1 Acidobacteria bacterium isolate gp2 AA108 14_0903_13_40cm_scaffold_26803_curated, whole genome shotgun sequence (3953 bp)
Overview 1 RT 1: 3-3800 bp Neighborhood of RT #1 [3, 3952] RVT-GII DEDD_Tnp_IS110 Transposase_20 Fes Feature: gene Location: 3-860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-855 bp Feature: gene Location: 1463-2731 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 1505-1973 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 1505-1973 bp Feature: domain Description: Transposase_20 Location: 2306-2555 bp Feature: domain Description: Transposase_20 Location: 23 06-2555 bp Feature: gene Location: 2960-3952 bp Feature: domain Description: Fes Location: 3356-3800 bp Feature: domain Description: Fes Location: 3 3 56-3 800 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371), Fes (COG2382), RVT-GII

Seq: QHYV01000643.1 Acidobacteria bacterium isolate gp2 AA108 14_0903_13_40cm_scaffold_56629_curated, whole genome shotgun sequence (2270 bp)
Overview 1 RT 1: 3-2231 bp Neighborhood of RT #1 [3, 2269] Resolvase Recombinase Zn_ribbon_recom arc_metj RVT-GII Feature: gene Location: 3-1388 bp Feature: domain Description: Resolvase Location: 18-459 bp Feature: domain Description: Resolvase Location: 18-4 59 bp Feature: domain Description: Recombinase Location: 546-909 bp Feature: domain Description: Recombinase Location: 54 6-909 bp Feature: domain Description: Zn_ribbon_recom Location: 948-1137 bp Feature: domain Description: Zn_ribbon_recom Location: 94 8-1137 bp Feature: gene Location: 1541-1870 bp Feature: domain Description: arc_metj Location: 1739-1856 bp Feature: domain Description: arc_metj Location: 1739-1856 bp Feature: gene Location: 1937-2269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1940-2231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194 0-2231 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT arc_metj (LOAD_arc_metj), RVT-GII, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)