myRT

myRT report for GCA_003225255.1_ASM322525v1

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Seq: QHYW01000229.1 Acidobacteria bacterium isolate gp2 AA107 14_1009_05_30cm_scaffold_1418_curated, whole genome shotgun sequence (29100 bp)
Overview 1 RT 1: 1052-4221 bp Neighborhood of RT #1 [1052, 4238] COG3795 RVT-GII arc_metj Feature: gene Location: 1052-1480 bp Feature: domain Description: COG3795 Location: 1055-1418 bp Feature: domain Description: COG3795 Location: 1 055-1 41 8 bp Feature: gene Location: 1661-1993 bp Feature: gene Location: 2312-3100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2318-2726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231 8-2726 bp Feature: gene Location: 3352-3636 bp Feature: gene Location: 4089-4238 bp Feature: domain Description: arc_metj Location: 4104-4221 bp Feature: domain Description: arc_metj Location: 41 04-4221 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3795 (Uncharacterized conserved protein ), RVT-GII, arc_metj (LOAD_arc_metj)

Seq: QHYW01000246.1 Acidobacteria bacterium isolate gp2 AA107 14_1009_05_30cm_scaffold_1987_curated, whole genome shotgun sequence (44772 bp)
Overview 1 RT 1: 107-5001 bp Neighborhood of RT #1 [107, 5003] RVT_N RVT-GII GIIM HNHc ADOP Feature: gene Location: 107-1831 bp Feature: domain Description: RVT_N Location: 158-401 bp Feature: domain Description: RVT_N Location: 158-401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 446-1100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 446-1100 bp Feature: domain Description: GIIM Note: maturase Location: 1154-1388 bp Feature: domain Description: GIIM Note: maturase Location: 1154-1388 bp Feature: domain Description: HNHc Note: nucleases Location: 1616-1772 bp Feature: domain Description: HNHc Note: nucleases Location: 1616-1772 bp Feature: gene Location: 1846-2016 bp Feature: gene Location: 2496-5003 bp Feature: domain Description: ADOP Location: 2577-5001 bp Feature: domain Description: ADOP Location: 2 577-5001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), ADOP (TIGR03434)

Seq: QHYW01000039.1 Acidobacteria bacterium isolate gp2 AA107 14_1009_05_30cm_scaffold_3373_curated, whole genome shotgun sequence (38091 bp)
Overview 1 RT 1: 34391-38090 bp Neighborhood of RT #1 [34391, 38090] AbfA GH43_Arb43a-like RVT-GII Feature: gene Location: 34391-35995 bp Feature: domain Description: AbfA Location: 34511-35987 bp Feature: domain Description: AbfA Location: 3 4511-3 5987 bp Feature: gene Location: 36173-37252 bp Feature: domain Description: GH43_Arb43a-like Location: 36305-37199 bp Feature: domain Description: GH43 _Arb43 a-like Location: 3 63 05-3 7199 bp Feature: gene Location: 37651-37872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37657-37798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 7657-3 7798 bp Feature: gene Location: 37881-38090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbfA (COG3534), GH43_Arb43a-like (cd08998), RVT-GII

Seq: QHYW01000069.1 Acidobacteria bacterium isolate gp2 AA107 14_1009_05_30cm_scaffold_4074_curated, whole genome shotgun sequence (10307 bp)
Overview 1 RT 1: 6159-10306 bp Neighborhood of RT #1 [6159, 10305] PEP_TPR_lipo TPR TPR RVT-GII GIIM RVT-GII Feature: gene Location: 6159-7526 bp Feature: domain Description: PEP_TPR_lipo Location: 6519-6744 bp Feature: domain Description: PEP_TPR_lipo Location: 6519-674 4 bp Feature: domain Description: TPR Location: 6897-7164 bp Feature: domain Description: TPR Location: 6897-7164 bp Feature: domain Description: TPR Location: 7215-7479 bp Feature: domain Description: TPR Location: 7215-74 79 bp Feature: gene Location: 7313-7510 bp Feature: gene Location: 8139-9476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8448-9072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84 4 8-9072 bp Feature: domain Description: GIIM Note: maturase Location: 9168-9384 bp Feature: domain Description: GIIM Note: maturase Location: 9168-9384 bp Feature: gene Location: 9604-10305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9934-10306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9934 -10306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PEP_TPR_lipo (TIGR02917), TPR (smart00028), RVT-GII, GIIM (pfam08388)

Seq: QHYW01000213.1 Acidobacteria bacterium isolate gp2 AA107 14_1009_05_30cm_scaffold_7834_curated, whole genome shotgun sequence (17292 bp)
Overview 1 RT 1: 14978-17291 bp Neighborhood of RT #1 [14978, 17290] TonB_C RVT-GII Feature: gene Location: 14978-15949 bp Feature: domain Description: TonB_C Location: 15746-15938 bp Feature: domain Description: TonB_C Location: 15 746-15 938 bp Feature: gene Location: 16292-16639 bp Feature: gene Location: 16892-17290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16898-17291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16898-17291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TonB_C (pfam03544), RVT-GII