myRT

myRT report for GCA_003225375.1_ASM322537v1

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Seq: QHZS01000553.1 Acidobacteria bacterium isolate gp1 AA149 14_0903_13_40cm_scaffold_11826_curated, whole genome shotgun sequence (8337 bp)
Overview 1 RT 1: 359-3014 bp Neighborhood of RT #1 [359, 3028] RVT-GII TonB_C Feature: gene Location: 359-1921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 857-1541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 857-1 541 bp Feature: gene Location: 2057-2224 bp Feature: gene Location: 2315-3028 bp Feature: domain Description: TonB_C Location: 2804-3014 bp Feature: domain Description: TonB_C Location: 2804-301 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TonB_C (pfam03544)

Seq: QHZS01001474.1 Acidobacteria bacterium isolate gp1 AA149 14_0903_13_40cm_scaffold_204590_curated, whole genome shotgun sequence (2757 bp)
Overview 1 RT 1: 471-2756 bp Neighborhood of RT #1 [471, 2755] Recombinase Zn_ribbon_recom RVT-GII GIIM Feature: gene Location: 471-788 bp Feature: gene Location: 1049-2242 bp Feature: domain Description: Recombinase Location: 1136-1496 bp Feature: domain Description: Recombinase Location: 1136-1496 bp Feature: domain Description: Zn_ribbon_recom Location: 1535-1724 bp Feature: domain Description: Zn_ribbon_recom Location: 1535-172 4 bp Feature: gene Location: 2327-2755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2336-2552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 336-2 552 bp Feature: domain Description: GIIM Note: maturase Location: 2630-2756 bp Feature: domain Description: GIIM Note: maturase Location: 2 630-2 756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, GIIM (pfam08388)

Seq: QHZS01000161.1 Acidobacteria bacterium isolate gp1 AA149 14_0903_13_40cm_scaffold_24874_curated, whole genome shotgun sequence (5380 bp)
Overview 1 RT 1: 3248-5088 bp Neighborhood of RT #1 [3248, 5306] RVT-GII Feature: gene Location: 3248-3403 bp Feature: gene Location: 3669-4037 bp Feature: gene Location: 4140-5306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4428-5088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4428-5088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QHZS01001122.1 Acidobacteria bacterium isolate gp1 AA149 14_0903_13_40cm_scaffold_70443_curated, whole genome shotgun sequence (3292 bp)
Overview 1 RT 1: 1551-3173 bp Neighborhood of RT #1 [1551, 3289] RVT-GII Feature: gene Location: 1551-1745 bp Feature: gene Location: 1912-2103 bp Feature: gene Location: 2363-3289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2555-3173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2555-3173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QHZS01000535.1 Acidobacteria bacterium isolate gp1 AA149 14_0903_13_40cm_scaffold_8874_curated, whole genome shotgun sequence (8232 bp)
Overview 1 RT 1: 1-5805 bp Neighborhood of RT #1 [1, 5849] HTH_Tnp_1 HTH_17 HTH_17 RVT-GII GIIM RVT-GII dnaG dnaG Feature: gene Location: 1-1119 bp Feature: domain Description: HTH_Tnp_1 Location: 148-256 bp Feature: domain Description: HTH_Tnp_1 Location: 148-25 6 bp Feature: domain Description: HTH_17 Location: 799-904 bp Feature: domain Description: HTH_17 Location: 799-904 bp Feature: domain Description: HTH_17 Location: 967-1081 bp Feature: domain Description: HTH_17 Location: 967-1081 bp Feature: gene Location: 1330-2592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1546-2200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 46-2200 bp Feature: domain Description: GIIM Note: maturase Location: 2284-2503 bp Feature: domain Description: GIIM Note: maturase Location: 2284-25 03 bp Feature: gene Location: 2616-3008 bp Feature: gene Location: 3102-3833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3672-3783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3672-3783 bp Feature: gene Location: 4178-4768 bp Feature: gene Location: 4851-5849 bp Feature: domain Description: dnaG Location: 4950-5439 bp Feature: domain Description: dnaG Location: 495 0-5 439 bp Feature: domain Description: dnaG Location: 5496-5805 bp Feature: domain Description: dnaG Location: 5 496-5 805 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), HTH_17 (pfam12728), RVT-GII, GIIM (pfam08388), dnaG (TIGR01391)